RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 CLEC19AQ6UXS0 136 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 SLC35G3Q8N808 338 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 OR9G4Q8NGQ1 327 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 DEDD2Q8WXF8 326 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 TRIM63Q969Q1 353 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 ENY2Q9NPA8 101 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 PEMTQ9UBM1 199 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 S4R3C0 116 aa10.27□□□□□ -0.77
CAPN1-209ENST00000527469 CRYM-AS1A6NIL9 109 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 K7EIL1 84 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 BMPR1BO00238 502 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 SNCAP37840 140 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 PRCDQ00LT1 54 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 IZUMO4Q1ZYL8 232 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 TMEM268Q5VZI3 342 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 TMED4Q7Z7H5 227 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 FAM219AQ8IW50 185 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 RBPMSQ93062 196 aaKnown RBP10.26□□□□□ -0.77
CAPN1-209ENST00000527469 PRR25Q96S07 402 aa10.26□□□□□ -0.77
CAPN1-209ENST00000527469 F11RQ9Y624 299 aaKnown RBP10.26□□□□□ -0.77
CAPN1-209ENST00000527469 PIGBOS1A0A0B4J2F0 54 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 MFSD2BA6NFX1 497 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 DBX1A6NMT0 343 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 CDS2O95674 445 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 GPR183P32249 361 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 HOXA1P49639 335 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-209ENST00000527469 SRPXP78539 464 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 FAM106AQ4KMX7 169 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 SPINK9Q5DT21 86 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 SLC25A21Q9BQT8 299 aaPredicted RBP10.25□□□□□ -0.77
CAPN1-209ENST00000527469 SRRQ9GZT4 340 aa10.25□□□□□ -0.77
CAPN1-209ENST00000527469 SORL1Q92673 2214 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 A0A0B4J293 547 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 LINC00854A0A1B0GVQ3 168 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 ZNF320A2RRD8 509 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 CENPXA8MT69 81 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 ST8SIA3O43173 380 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 OR2C1O95371 312 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 HLA-AP01891 365 aaKnown RBP10.24□□□□□ -0.77
CAPN1-209ENST00000527469 CLEC3BP05452 202 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 SUB1P53999 127 aaKnown RBP eCLIP10.24□□□□□ -0.77
CAPN1-209ENST00000527469 KLK9Q2XQG4 91 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 PLET1Q6UQ28 207 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 SELENOHQ8IZQ5 122 aaKnown RBP10.24□□□□□ -0.77
CAPN1-209ENST00000527469 UBAC2Q8NBM4 344 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 OR1P1Q8NH06 330 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 VN1R17PQ8TDU5 208 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 GLYATL2Q8WU03 294 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 MISP3Q96FF7 219 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 CCDC140Q96MF4 163 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 ZC4H2Q9NQZ6 224 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.24□□□□□ -0.77
CAPN1-209ENST00000527469 KLK9Q9UKQ9 250 aa10.24□□□□□ -0.77
CAPN1-209ENST00000527469 IGHV3-21A0A0B4J1V1 117 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 NAP1L6A6NFF2 107 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 VAMP1P23763 118 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 Q56UQ5 140 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 HAPLN4Q86UW8 402 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 OR2C3Q8N628 320 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 ZNF502Q8TBZ5 544 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 DYNLRB2Q8TF09 96 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 C21orf62Q9NYP8 219 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 CACNG5Q9UF02 275 aa10.23□□□□□ -0.77
CAPN1-209ENST00000527469 OR2T8A6NH00 312 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 P0C879 139 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 SPNP16150 400 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 CD69Q07108 199 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 RBMS2Q15434 407 aaKnown RBP10.22□□□□□ -0.77
CAPN1-209ENST00000527469 LGI3Q8N145 548 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 LHFPL5Q8TAF8 219 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 IL22RA2Q969J5 263 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 TMEM230Q96A57 120 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 PINX1Q96BK5 328 aaKnown RBP10.22□□□□□ -0.77
CAPN1-209ENST00000527469 GALNT14Q96FL9 552 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 GAR1Q9NY12 217 aaKnown RBP10.22□□□□□ -0.77
CAPN1-209ENST00000527469 CACFD1Q9UGQ2 172 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 DMRT1Q9Y5R6 373 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 TMEM56-RWDD3S4R434 201 aa10.22□□□□□ -0.77
CAPN1-209ENST00000527469 A0A0G2JRQ6 117 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 CEBPZOSA8MTT3 80 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 TGOLN2O43493 480 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 IGLV1-51P01701 117 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 CSN3P07498 182 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 SULT1A3P0DMM9 295 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 SULT1A4P0DMN0 295 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 GP9P14770 177 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 SPCS3P61009 180 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 TMEM187Q14656 261 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 BAK1Q16611 211 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 TMEM128Q5BJH2 165 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 LCN12Q6JVE5 192 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 GPHB5Q86YW7 130 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 CENPSQ8N2Z9 138 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 ZNF114Q8NC26 417 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 SCARB1Q8WTV0 552 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 BSCL2Q96G97 398 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-209ENST00000527469 PALMDQ9NP74 551 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 HEYLQ9NQ87 328 aaPredicted RBP10.21□□□□□ -0.77
CAPN1-209ENST00000527469 PRR13Q9NZ81 148 aa10.21□□□□□ -0.77
CAPN1-209ENST00000527469 A0A0B4J2A0 478 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms