RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 SPATA25Q9BR10 227 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 HIPK2Q9H2X6 1198 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 GAR1Q9NY12 217 aaKnown RBP7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 SLC2A8Q9NY64 477 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 THYN1Q9P016 225 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 MTFP1Q9UDX5 166 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 CEPT1Q9Y6K0 416 aa7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 DYNC2H1Q8NCM8 4307 aaKnown RBP7.82□□□□□ -1.16
PRPF40B-204ENST00000527253 SCAF4O95104 1147 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 IGKV1-5P01602 117 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 CD74P04233 296 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 P0C879 139 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 LYL1P12980 280 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 RND3P61587 244 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 ZFAND6Q6FIF0 208 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 OR2C3Q8N628 320 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 TMEM190Q8WZ59 177 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 AP3S1Q92572 193 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 TP53RKQ96S44 253 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 FAM110AQ9BQ89 295 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 MRPS26Q9BYN8 205 aaKnown RBP7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 SRD5A3Q9H8P0 318 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 C21orf62Q9NYP8 219 aa7.81□□□□□ -1.16
PRPF40B-204ENST00000527253 IGHV3OR16-8A0A075B7F1 116 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 I3L2K1 104 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 CTSGP08311 255 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 PGAM2P15259 253 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 ELLP55199 621 aaPredicted RBP7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 PIGPP57054 158 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 PRCDQ00LT1 54 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 SPINK9Q5DT21 86 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 RNASE10Q5GAN6 216 aaKnown RBP7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 H2BFWTQ7Z2G1 175 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 GPR141Q7Z602 305 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 TMEM229BQ8NBD8 167 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 OR1P1Q8NH06 330 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 BSCL2Q96G97 398 aaPredicted RBP7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 TSC22D3Q99576 134 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 PALMDQ9NP74 551 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 FKBP11Q9NYL4 201 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 MRPL27Q9P0M9 148 aaKnown RBP7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 UFC1Q9Y3C8 167 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 STARD9Q9P2P6 4700 aa7.8□□□□□ -1.16
PRPF40B-204ENST00000527253 A0A0B4J293 547 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 A0A0G2JRQ6 117 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 NDUFA4O00483 81 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 ZNF207O43670 478 aaKnown RBP7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 IGHV3-48P01763 117 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 IFNA6P05013 189 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 S100GP29377 79 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 PPP5CP53041 499 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 HSPE1P61604 102 aaKnown RBP7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 SP6Q3SY56 376 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 FAAP20Q6NZ36 180 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 CLVS1Q8IUQ0 354 aaPredicted RBP7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 ARRDC1Q8N5I2 433 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 OR13C8Q8NGS7 320 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 OR4A16Q8NH70 328 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 TERB2Q8NHR7 220 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 MARC2Q969Z3 335 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 TMEM56Q96MV1 263 aa7.79□□□□□ -1.16
PRPF40B-204ENST00000527253 TRAV25A0A0B4J276 109 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 C3orf85A0A1B0GTC6 90 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 CYB5BO43169 146 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 RAB3DO95716 219 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 TBPP20226 339 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 Q56UQ5 140 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 STEAP1BQ6NZ63 245 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 SPSB3Q6PJ21 355 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 SLC16A13Q7RTY0 426 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 UBAC2Q8NBM4 344 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 ZNF114Q8NC26 417 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 OR52B4Q8NGK2 314 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 OR1L6Q8NGR2 347 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 MARCH1Q8TCQ1 289 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 DYNC2LI1Q8TCX1 351 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 ISOC1Q96CN7 298 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 MISP3Q96FF7 219 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 ZNF486Q96H40 463 aaPredicted RBP7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 ATP6V0BQ99437 205 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 RTBDNQ9BSG5 229 aaPredicted RBP7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 C5orf66Q9H5L9 145 aa7.78□□□□□ -1.16
PRPF40B-204ENST00000527253 CSMD3Q7Z407 3707 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 GABARAPH6UMI1 98 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 K7EMT4 169 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 ST8SIA3O43173 380 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 MT-CO2P00403 227 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 CTSDP07339 412 aaPredicted RBP7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 FCGR2BP31994 310 aaPredicted RBP7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 TAS2R19P59542 299 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 SCGB2B2Q4G0G5 96 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 PVRIGQ6DKI7 326 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 Q6ZRM9 215 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 RBPMS2Q6ZRY4 209 aaKnown RBP7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 C20orf24Q9BUV8 137 aa7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 DAZ1Q9NQZ3 744 aaKnown RBP7.77□□□□□ -1.17
PRPF40B-204ENST00000527253 SACSQ9NZJ4 4579 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 IGHV3-49A0A0A0MS15 119 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 TSPAN4O14817 238 aa7.76□□□□□ -1.17
PRPF40B-204ENST00000527253 RGS5O15539 181 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms