RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 MOB1BQ7L9L4 216 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 LINC01551Q86U37 167 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 MARCH3Q86UD3 253 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 LRP11Q86VZ4 500 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 ZNF555Q8NEP9 628 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 OR2M3Q8NG83 312 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 OR4E2Q8NGC2 313 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 OR1J4Q8NGS1 313 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 LMX1AQ8TE12 382 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 ZNF721Q8TF20 911 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 RTN4IP1Q8WWV3 396 aaPredicted RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 NEUROG1Q92886 237 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 GNPNAT1Q96EK6 184 aaPredicted RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 ZNF778Q96MU6 729 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 ERMAPQ96PL5 475 aaPredicted RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 OR2A5Q96R48 311 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 TIMM17AQ99595 171 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 CCL13Q99616 98 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 HSD17B10Q99714 261 aaKnown RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 MRPL16Q9NX20 251 aaKnown RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 FBXL12Q9NXK8 326 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 TVP23BQ9NYZ1 205 aa3.3□□□□□ -1.88
CD44-213ENST00000525209 ZNF230Q9UIE0 474 aaPredicted RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 AMMECR1Q9Y4X0 333 aaPredicted RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 ZNF106Q9H2Y7 1883 aaKnown RBP3.3□□□□□ -1.88
CD44-213ENST00000525209 DUOX1Q9NRD9 1551 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 ZNF646O15015 1829 aaPredicted RBP3.29□□□□□ -1.88
CD44-213ENST00000525209 TRAV19A0A0A6YYK7 116 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 IGHV3-74A0A0B4J1X5 117 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 TRAV5A0A0B4J249 113 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 TRDV1A0A1B0GX56 115 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 A8MXK9 166 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 B4DEV8 164 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 H7BYZ3 331 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 CORTO00230 105 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 LST1O00453 97 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 OR7C2O60412 319 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 IGLV3-27P01718 113 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 OPN1SWP03999 348 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 HLA-DPB1P04440 258 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 AZU1P20160 251 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 CDKN2AP42771 156 aaKnown RBP3.29□□□□□ -1.88
CD44-213ENST00000525209 CXCL12P48061 93 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 GABARAPL2P60520 117 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 PPP3R1P63098 170 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 KIAA0040Q15053 153 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 ELOCQ15369 112 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 KRTAP27-1Q3LI81 207 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 EBLN2Q6P2I7 272 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 WDR59Q6PJI9 974 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 ZNF497Q6ZNH5 498 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 C1orf174Q8IYL3 243 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 SLC22A24Q8N4F4 322 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 Q8NBF4 154 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 C7orf33Q8WU49 177 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 ABHD14BQ96IU4 210 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 CARD19Q96LW7 228 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 PGLYRP2Q96PD5 576 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 NRIP2Q9BQI9 281 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 RTL8AQ9BWD3 113 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 ZNF471Q9BX82 626 aaPredicted RBP3.29□□□□□ -1.88
CD44-213ENST00000525209 CTSZQ9UBR2 303 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 MCTS1Q9ULC4 181 aaKnown RBP3.29□□□□□ -1.88
CD44-213ENST00000525209 TNFSF18Q9UNG2 199 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 LRRC37AA6NMS7 1700 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 COL6A3P12111 3177 aa3.29□□□□□ -1.88
CD44-213ENST00000525209 COL1A1P02452 1464 aaPredicted RBP3.28□□□□□ -1.88
CD44-213ENST00000525209 DOCK6Q96HP0 2047 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 IGKV6-21A0A0C4DH24 114 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 TMEM72A0PK05 275 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 A8MUN3 132 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 GABARAPO95166 117 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 IGHV3-23P01764 117 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 PATE4P0C8F1 98 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 OPRM1P35372 400 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 OPRK1P41145 380 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 PKIAP61925 76 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 SLC38A11Q08AI6 406 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 PSG7Q13046 419 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 FKBP1CQ5VVH2 108 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 Q5XG85 94 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 CEMP1Q6PRD7 247 aaPredicted RBP3.28□□□□□ -1.88
CD44-213ENST00000525209 WDR86Q86TI4 376 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 LHFPL1Q86WI0 220 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 NPBQ8NG41 125 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 OR52R1Q8NGF1 315 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 OR10D4PQ8NGN7 298 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 FAM57AQ8TBR7 257 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 MRPL30Q8TCC3 161 aaKnown RBP3.28□□□□□ -1.88
CD44-213ENST00000525209 ZNF418Q8TF45 676 aaPredicted RBP3.28□□□□□ -1.88
CD44-213ENST00000525209 TMEM106AQ96A25 262 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 PRADC1Q9BSG0 188 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 OR2J1Q9GZK6 312 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 IMUPQ9GZP8 106 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 C11orf68Q9H3H3 251 aaKnown RBP3.28□□□□□ -1.88
CD44-213ENST00000525209 CST9LQ9H4G1 147 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 CA10Q9NS85 328 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 OR5AC2Q9NZP5 309 aa3.28□□□□□ -1.88
CD44-213ENST00000525209 NUFIP1Q9UHK0 495 aaKnown RBP3.28□□□□□ -1.88
CD44-213ENST00000525209 AK3Q9UIJ7 227 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms