RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ENPP4Q9Y6X5 453 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 R4GMQ9 66 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 U3KQV3 271 aa0.96□□□□□ -2.26
CD44-212ENST00000524922 MUC17Q685J3 4493 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 IGLV11-55A0A075B6I3 123 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 IGHV3OR16-8A0A075B7F1 116 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 A0A087WTM6 91 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 MEIKINA0A087WXM9 373 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 IGHV3-64DA0A0J9YX35 117 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 TMEM269A0A1B0GVZ9 245 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ZFP92A6NM28 416 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 RIIAD1A6NNX1 92 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 INS-IGF2F8WCM5 200 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 H7C1C5 153 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SDCBPO00560 298 aaPredicted RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 CCSO14618 274 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 DEGS1O15121 323 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 RBFOX2O43251 390 aaKnown RBP eCLIP0.95□□□□□ -2.26
CD44-212ENST00000524922 SCGB2A1O75556 95 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 CA1P00915 261 aaPredicted RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 CA2P00918 260 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 APOA2P02652 100 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 TTRP02766 147 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 HMGN1P05114 100 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 H2BFMP0C1H6 154 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 PIPP12273 146 aaPredicted RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 ZNF44P15621 663 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 CD24P25063 80 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 PAX6P26367 422 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 KDELR2P33947 212 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SSTR5P35346 364 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 OR1E2P47887 323 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 EIF2B2P49770 351 aaKnown RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 RORCP51449 518 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 PRKXP51817 358 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 LCN6P62502 163 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ELF3P78545 371 aaPredicted RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 RHOGP84095 191 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ATP5G2Q06055 141 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 AESQ08117 197 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 CBX3Q13185 183 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SLAQ13239 276 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 EXOSC2Q13868 293 aaKnown RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 EDDM3AQ14507 147 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 FXYD3Q14802 87 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 PSG5Q15238 335 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 MAPRE2Q15555 327 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 GUCA2BQ16661 112 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 MEP1BQ16820 701 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 WHAMMP3Q1A5X7 153 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 VMA21Q3ZAQ7 101 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 MORN2Q502X0 79 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 CYBRD1Q53TN4 286 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 PAN3Q58A45 887 aaKnown RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 CT45A1Q5HYN5 189 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SAMD4BQ5PRF9 694 aaKnown RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 TMEM244Q5VVB8 128 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ZNF773Q6PK81 442 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ZNF493Q6ZR52 646 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 Q6ZS49 121 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SLC25A26Q70HW3 274 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 NRARPQ7Z6K4 114 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 NAA40Q86UY6 237 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 HIST2H2ABQ8IUE6 130 aaPredicted RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 RBM45Q8IUH3 476 aaKnown RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 FUNDC1Q8IVP5 155 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 GID4Q8IVV7 300 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SERPINA12Q8IW75 414 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 TMEM256Q8N2U0 113 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SLC35F6Q8N357 371 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 STX19Q8N4C7 294 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ARL6IP6Q8N6S5 226 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 SMYD1Q8NB12 490 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 DUSP18Q8NEJ0 188 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 LFNGQ8NES3 379 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 OR51A2Q8NGJ7 313 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 OR10J6PQ8NGY7 276 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 CT45A3Q8NHU0 189 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ZNF502Q8TBZ5 544 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 UBLCP1Q8WVY7 318 aaPredicted RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 DYDC1Q8WWB3 177 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 TMEM37Q8WXS4 190 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 PELI1Q96FA3 418 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 MRPL48Q96GC5 212 aaKnown RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 RNF185Q96GF1 192 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 LINC01600Q96MT4 127 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 OPALINQ96PE5 141 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ERMAPQ96PL5 475 aaPredicted RBP0.95□□□□□ -2.26
CD44-212ENST00000524922 RAB40CQ96S21 281 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 TEAD3Q99594 435 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 C20orf144Q9BQM9 153 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 GINS3Q9BRX5 216 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 NIPSNAP3BQ9BS92 247 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 ATG101Q9BSB4 218 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 CHAC1Q9BUX1 264 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 PECRQ9BY49 303 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 WFDC10AQ9H1F0 79 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 GORASP2Q9H8Y8 452 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 AMBNQ9NP70 447 aa0.95□□□□□ -2.26
CD44-212ENST00000524922 GPR84Q9NQS5 396 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms