RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 TNCP24821 2201 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 NPIPB5A8MRT5 1133 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 G3V318 75 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 TSC22D2O75157 780 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 SLC25A4P12235 298 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 NPY1RP25929 384 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 PAX9P55771 341 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 AKIRIN2Q53H80 203 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 SPANXN5Q5MJ07 72 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 STPG2Q8N412 459 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 RNF126Q9BV68 326 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 C11orf1Q9H5F2 150 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 ZNF580Q9UK33 172 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 STRAPQ9Y3F4 350 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 U3KQ87 197 aa12.46□□□□□ -0.41
TSPAN4-213ENST00000524895 CUBNO60494 3623 aa12.46□□□□□ -0.42
TSPAN4-213ENST00000524895 TSPAN9O75954 239 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 DEFA4P12838 97 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 LYL1P12980 280 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 P2RY1P47900 373 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 SUB1P53999 127 aaKnown RBP eCLIP12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 SRSF2Q01130 221 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 ZFP69Q49AA0 526 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 TTC9CQ8N5M4 171 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 ZNF114Q8NC26 417 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 OR5T1Q8NG75 326 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 FAM110DQ8TAY7 271 aaPredicted RBP12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 TAF15Q92804 592 aaKnown RBP eCLIP12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 OR4C12Q96R67 309 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 P2RX4Q99571 388 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 GON7Q9BXV9 100 aa12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 LYRM2Q9NU23 88 aaPredicted RBP12.45□□□□□ -0.42
TSPAN4-213ENST00000524895 PLXNB1O43157 2135 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 FBXO24O75426 580 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 C1QBP02746 253 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 CRYGCP07315 174 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 OR8U8P0C7N1 319 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 RNASE2P10153 161 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 CTRB1P17538 263 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 NUP62P37198 522 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 RAB11AP62491 216 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 BSXQ3C1V8 233 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 CTRB2Q6GPI1 263 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 C19orf35Q6ZS72 473 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 NOXA1Q86UR1 476 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 OR1P1Q8NH06 330 aa12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 F11RQ9Y624 299 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-213ENST00000524895 FAM24AA6NFZ4 105 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 C15orf62A8K5M9 175 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 CYB5BO43169 146 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 NDUFA7O95182 113 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 ATP5IP56385 69 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 SLC35B1P78383 322 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 C2orf83Q53S99 150 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 C19orf54Q5BKX5 351 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 ZNF546Q86UE3 836 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 STX12Q86Y82 276 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 INO80EQ8NBZ0 244 aaPredicted RBP12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 OR1L6Q8NGR2 347 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 WNT10AQ9GZT5 417 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 SLC25A31Q9H0C2 315 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 ZC4H2Q9NQZ6 224 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 ZNF355PQ9NSJ1 428 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 SERTAD4Q9NUC0 356 aa12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 NIPBLQ6KC79 2804 aaeCLIP12.43□□□□□ -0.42
TSPAN4-213ENST00000524895 IGSF23A1L1A6 192 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 ARPC5O15511 151 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 PRH1P02810 166 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 IFNA4P05014 189 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 METTL15P1P0C7V9 234 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 RPL12P30050 165 aaKnown RBP12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 TMEM14EPQ6UXP3 125 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 OR11H4Q8NGC9 324 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 OR4F5Q8NH21 305 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 TMEM170AQ8WVE7 144 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 C16orf95Q9H693 158 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
TSPAN4-213ENST00000524895 PSMB11A5LHX3 300 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 PPIFP30405 207 aaKnown RBP12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 SULT1A1P50225 295 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 EWSR1Q01844 656 aaKnown RBP eCLIP12.41□□□□□ -0.422e-6■■■■□ 21.7
TSPAN4-213ENST00000524895 CFHR3Q02985 330 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 OR8G2PQ6IF36 304 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 SLC25A24Q6NUK1 477 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 TMEM65Q6PI78 240 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 ETV3LQ6ZN32 361 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 TMEM252Q8N6L7 170 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 MISP3Q96FF7 219 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 HYLS1Q96M11 299 aa12.41□□□□□ -0.42
TSPAN4-213ENST00000524895 HMSDA8MTL9 139 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 CORTO00230 105 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 SOX15O60248 233 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 CST7O76096 145 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 SCAF4O95104 1147 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 HKR1P10072 659 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 HIST1H1BP16401 226 aaKnown RBP12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 MFAP2P55001 183 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 BAXQ07812 192 aa12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 CENPVQ7Z7K6 275 aaPredicted RBP12.4□□□□□ -0.42
TSPAN4-213ENST00000524895 ZNF329Q86UD4 541 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms