RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 SFXN4Q6P4A7 337 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 TMEM86BQ8N661 226 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 ST6GALNAC3Q8NDV1 305 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 OR51H1Q8NH63 302 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 MCFD2Q8NI22 146 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 FNDC9Q8TBE3 224 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 C1orf54Q8WWF1 131 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 CYGBQ8WWM9 190 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 DCUN1D1Q96GG9 259 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 ABHD14BQ96IU4 210 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 GPER1Q99527 375 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 CCDC32Q9BV29 185 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 GNB1LQ9BYB4 327 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 MED28Q9H204 178 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 DCSTAMPQ9H295 470 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 FAM96AQ9H5X1 160 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 LRTM1Q9HBL6 345 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 RASL12Q9NYN1 266 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 IDI2-AS1Q9NZ38 188 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 SS18L2Q9UHA2 77 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 PYCARDQ9ULZ3 195 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 ANGPT4Q9Y264 503 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 POLR1DQ9Y2S0 133 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 SETD5Q9C0A6 1442 aa1.38□□□□□ -2.19
PCM1-219ENST00000523540 GRIN2BQ13224 1484 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 ARAP1Q96P48 1450 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 NYNRINQ9P2P1 1898 aaKnown RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 TENM1Q9UKZ4 2725 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 MAP1LC3B2A6NCE7 125 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 ARL5CA6NH57 179 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 OR4C46A6NHA9 309 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 TRAPPC2LH3BP13 241 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 UBFD1O14562 309 aaKnown RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 HMGB3O15347 200 aaKnown RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 CYB5BO43169 146 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 TPST1O60507 370 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 STK16O75716 305 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 S100A8P05109 93 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 BPGMP07738 259 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 IL3P08700 152 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 CCL3P10147 92 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 ATP6V0CP27449 155 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 GNG2P59768 71 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 DNAJB13P59910 316 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 CKS1BP61024 79 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 EMX1Q04741 257 aaPredicted RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 C1DQ13901 141 aaKnown RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 ACOT6Q3I5F7 207 aaPredicted RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 C9orf64Q5T6V5 341 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 TMEM78Q5T7P6 136 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 TEX36Q5VZQ5 186 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 LPCAT3Q6P1A2 487 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 TOMM20LQ6UXN7 152 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 Q6ZRN7 208 aaPredicted RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 C2orf91Q6ZV80 131 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 C1orf158Q8N1D5 194 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 SLC35F6Q8N357 371 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 ZNF283Q8N7M2 679 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 OR51A2Q8NGJ7 313 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 OR9Q1Q8NGQ5 310 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 OR5J2Q8NH18 312 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 TMEM203Q969S6 136 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 BORCS7Q96B45 105 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 DIRAS2Q96HU8 199 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 MROQ9BYG7 248 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 MAP1LC3BQ9GZQ8 125 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 CISHQ9NSE2 258 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 NDUFB11Q9NX14 153 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 COA4Q9NYJ1 87 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 COPZ2Q9P299 210 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 JPT1Q9UK76 154 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 SNX12Q9UMY4 172 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 HELZ2Q9BYK8 2649 aaKnown RBP1.37□□□□□ -2.19
PCM1-219ENST00000523540 VPS8Q8N3P4 1428 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 DSCAMO60469 2012 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 UHRF1BP1LA0JNW5 1464 aa1.37□□□□□ -2.19
PCM1-219ENST00000523540 AKAP12Q02952 1782 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 XIRP1Q702N8 1843 aaKnown RBP1.36□□□□□ -2.19
PCM1-219ENST00000523540 A0A1B0GV50 99 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 PVALEFA0A1B0GWK0 134 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 C9orf170A2RU37 121 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 GRIFINA4D1Z8 144 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 CCDC160A6NGH7 325 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 C11orf86A6NJI1 115 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 E7EQ34 232 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 G3V2T6 193 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 BCL9O00512 1426 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 FAAHO00519 579 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 COPEO14579 308 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 GNRH2O43555 120 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 ORC5O43913 435 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 MFSD11O43934 449 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 PHLPP1O60346 1717 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 IFNGP01579 166 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 C1QCP02747 245 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 IFNA4P05014 189 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 REG1AP05451 166 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 HTR1AP08908 422 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 CD7P09564 240 aa1.36□□□□□ -2.19
PCM1-219ENST00000523540 OR5G3P0C626 314 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms