RNA–Protein interactions for RNA: ENST00000523430.5

SQLE-206, Transcript of squalene epoxidase, humanhuman

TSL 2 BASIC

Gene SQLE, Length 1,879 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-206ENST00000523430 SAA4P35542 130 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 RPL27AP46776 148 aaKnown RBP16.62■□□□□ 0.25
SQLE-206ENST00000523430 HES1Q14469 280 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 PLGLAQ15195 96 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 COMMD1Q8N668 190 aa16.62■□□□□ 0.25
SQLE-206ENST00000523430 TBL2Q9Y4P3 447 aaKnown RBP16.62■□□□□ 0.25
SQLE-206ENST00000523430 OOSP1A8MZH6 123 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 C17orf112F2Z3M2 114 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 FCN1O00602 326 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 NBR2O15453 112 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 SCO1O75880 301 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 CD5P06127 495 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 PLA2G2AP14555 144 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 PAX8Q06710 450 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 LSM4Q9Y4Z0 139 aaKnown RBP16.61■□□□□ 0.25
SQLE-206ENST00000523430 ATP5IP56385 69 aaPredicted RBP16.61■□□□□ 0.25
SQLE-206ENST00000523430 GUK1Q16774 197 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 RPP25LQ8N5L8 163 aaKnown RBP16.61■□□□□ 0.25
SQLE-206ENST00000523430 LFNGQ8NES3 379 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 P2RX4Q99571 388 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 GGTLC1Q9BX51 225 aa16.61■□□□□ 0.25
SQLE-206ENST00000523430 DEFA4P12838 97 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 AREGP15514 252 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 MAS1LP35410 378 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 CLEC12BQ2HXU8 276 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 LCN15Q6UWW0 184 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 C19orf35Q6ZS72 473 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 NPVFQ9HCQ7 196 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 CHD6Q8TD26 2715 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 MED13LQ71F56 2210 aa16.6■□□□□ 0.25
SQLE-206ENST00000523430 CENPVL3A0A0U1RRI6 287 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 MPDU1O75352 247 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 MLANAQ16655 118 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 PIP4P2Q8N4L2 257 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 NPBQ8NG41 125 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 SLC25A22Q9H936 323 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 TEX22C9J3V5 150 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 NPFFO15130 113 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 NDUFA3O95167 84 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 APOC3P02656 99 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 FGF8P55075 233 aaPredicted RBP16.59■□□□□ 0.25
SQLE-206ENST00000523430 DSCR9P59020 149 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 GCSAMLQ5JQS6 135 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 OR2T10Q8NGZ9 312 aa16.59■□□□□ 0.25
SQLE-206ENST00000523430 SRSF12Q8WXF0 261 aaKnown RBP16.59■□□□□ 0.25
SQLE-206ENST00000523430 EIF5A2Q9GZV4 153 aaKnown RBP16.59■□□□□ 0.25
SQLE-206ENST00000523430 IGHV3OR16-10A0A075B7F0 116 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 BTBD17A6NE02 478 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 FNDC10F2Z333 226 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 SFTA3P0C7M3 94 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 CD69Q07108 199 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 MIC13Q5XKP0 118 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 RUSC1-AS1Q66K80 236 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 TEPPQ6URK8 271 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 Q8N6K4 173 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 OR10G4Q8NGN3 311 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 OR10G9Q8NGN4 311 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 OR10G7Q8NGN6 311 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 MALSU1Q96EH3 234 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 KIAA1456Q9P272 454 aa16.58■□□□□ 0.24
SQLE-206ENST00000523430 SPG11Q96JI7 2443 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 TRAV1-1A0A0B4J248 108 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 HBE1P02100 147 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 OPRK1P41145 380 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 SLC16A13Q7RTY0 426 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 SSMEM1Q8WWF3 244 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 MBD3L1Q8WWY6 194 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 RARRES2Q99969 163 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 PXMP4Q9Y6I8 212 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 CELSR2Q9HCU4 2923 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 WNK2Q9Y3S1 2297 aa16.57■□□□□ 0.24
SQLE-206ENST00000523430 MAP1LC3B2A6NCE7 125 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 HMGB3O15347 200 aaKnown RBP16.56■□□□□ 0.24
SQLE-206ENST00000523430 MBP02144 154 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 MSMBP08118 114 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 GAMTQ14353 236 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 FAM120AOSQ5T036 256 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 FAM122CQ6P4D5 195 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 MAP1LC3BQ9GZQ8 125 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 NAV3Q8IVL0 2385 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 IGKV1OR2-108A0A075B7D4 117 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 F8W036 122 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 YIF1AO95070 293 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 MFAP2P55001 183 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 HAGHQ16775 308 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 PBDC1Q9BVG4 233 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 FNDC4Q9H6D8 234 aaPredicted RBP16.56■□□□□ 0.24
SQLE-206ENST00000523430 TENM4Q6N022 2769 aa16.56■□□□□ 0.24
SQLE-206ENST00000523430 PLXNB1O43157 2135 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 TRAV40A0A0B4J280 105 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 SLC25A16P16260 332 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 TMEM11P17152 192 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 M6PRP20645 277 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 PPT1P50897 306 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 SUB1P53999 127 aaKnown RBP eCLIP16.55■□□□□ 0.24
SQLE-206ENST00000523430 EBI3Q14213 229 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 C5orf64Q2M2E5 130 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 MRPL41Q8IXM3 137 aaKnown RBP16.55■□□□□ 0.24
SQLE-206ENST00000523430 ZNF114Q8NC26 417 aa16.55■□□□□ 0.24
SQLE-206ENST00000523430 RNASEH2CQ8TDP1 164 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms