RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 C20orf204Q6ZNR8 217 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 NHLRC2Q8NBF2 726 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 OR2D3Q8NGH3 330 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 PRSS3P2Q8NHM4 247 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 COQ2Q96H96 371 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 UFC1Q9Y3C8 167 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 ARL2-SNX15V9GYD0 113 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 F5H697 171 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 GNLYP22749 145 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 HTN1P15515 57 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 ZNF137PP52743 207 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 MFAP2P55001 183 aa10.86□□□□□ -0.67
PCDHGB1-201ENST00000523390 HIST1H1EP10412 219 aaKnown RBP10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 ADIPOQQ15848 244 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 WDR25Q64LD2 544 aaPredicted RBP10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 GATAD1Q8WUU5 269 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 PARLQ9H300 379 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 IL4P05112 153 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 HOXA4Q00056 320 aaPredicted RBP10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 LRTM2Q8N967 370 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 TXNDC17Q9BRA2 123 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 DKK1O94907 266 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 GCHFRP30047 84 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 LINC00205P59089 165 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 OR4D5Q8NGN0 318 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 OR51M1Q9H341 326 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGKV1D-17A0A075B6S4 117 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 UPK2O00526 184 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 TNFSF13O75888 250 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGHV3-23P01764 117 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGFL3Q6UXB1 125 aa10.85□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGHV3OR16-8A0A075B7F1 116 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 A0A1W2PNU3 283 aaPredicted RBP10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 TMEM178BH3BS89 294 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 ASCL4Q6XD76 172 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 C7orf69Q9H7B7 122 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 ALPK3Q96L96 1907 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 CGB1A6NKQ9 187 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 CA7P43166 264 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 ATP5IP56385 69 aaPredicted RBP10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 CYP2G1PQ6ZSU1 146 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 HIST1H2BAQ96A08 127 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 CRIM1Q9NZV1 1036 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 CEP295Q9C0D2 2601 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 BMPR1BO00238 502 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 GBGT1Q8N5D6 347 aa10.84□□□□□ -0.67
PCDHGB1-201ENST00000523390 IGHV3-49A0A0A0MS15 119 aa10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 SEC14L6B5MCN3 397 aa10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 RBFOX2O43251 390 aaKnown RBP eCLIP10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 HERPUD1Q15011 391 aa10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 C10orf55Q5SWW7 151 aa10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 COL4A4P53420 1690 aaPredicted RBP10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 C15orf61A6NNL5 157 aa10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 SRSF7Q16629 238 aaKnown RBP eCLIP10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 METTL26Q96S19 204 aa10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 WFDC1Q9HC57 220 aa10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 IBA57Q5T440 356 aaKnown RBP10.83□□□□□ -0.68
PCDHGB1-201ENST00000523390 K7EM74 188 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 SMAD7O15105 426 aaKnown RBP10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 TGFAP01135 160 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 IGKV1-5P01602 117 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 NHLH1Q02575 133 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 HEPN1Q6WQI6 88 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 LINC00305Q7Z4B0 112 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 RNF138Q8WVD3 245 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 TRGC2P03986 189 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 ZNF506Q5JVG8 444 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 FAM215AQ9Y5M1 114 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 CGAP01215 116 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 CFPP27918 469 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 TMEM200BQ69YZ2 307 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 TRAV30A0A087WSZ9 112 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 ADCYAP1P18509 176 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 ZNF343Q6P1L6 599 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 Q6ZR03 302 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 ZNF383Q8NA42 475 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 ST6GALNAC3Q8NDV1 305 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 DYNLRB2Q8TF09 96 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 SRSF12Q8WXF0 261 aaKnown RBP10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 C16orf92Q96LL3 132 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 GGACTQ9BVM4 153 aa10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 FOXA2Q9Y261 457 aaPredicted RBP10.82□□□□□ -0.68
PCDHGB1-201ENST00000523390 ELOA3CA0A087WX78 387 aaPredicted RBP10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 TIMM23O14925 209 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 FCER1GP30273 86 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 RIGQ13278 110 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 DCAF16Q9NXF7 216 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 CARHSP1Q9Y2V2 147 aaKnown RBP10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 PCNX3Q9H6A9 2034 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 E7EQL1 145 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 COX19Q49B96 90 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 NMSQ5H8A3 153 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 C11orf42Q8N5U0 333 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 NUP37Q8NFH4 326 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 ARFGEF3Q5TH69 2177 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 PPP1R27Q86WC6 154 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 GSN-AS1Q9NRJ2 163 aa10.81□□□□□ -0.68
PCDHGB1-201ENST00000523390 ZNF106Q9H2Y7 1883 aaKnown RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms