RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 RAB40CQ96S21 281 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 ZNF446Q9NWS9 450 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 SPATA2Q9UM82 520 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 RFNGQ9Y644 331 aa9.69□□□□□ -0.86
NKX3-1-202ENST00000523261 IGKV1D-8A0A087WSZ0 117 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 IGKV1D-13A0A0B4J2D9 117 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 EI24O14681 340 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 SLC22A5O76082 557 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 HLA-DQB1P01920 261 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 IGKV1-13P0DP09 117 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 MYL12AP19105 171 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 CCL18P55774 89 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 KRTAP10-1P60331 282 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 P2RY14Q15391 338 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 RBM48Q5RL73 367 aaKnown RBP9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 THOC7Q6I9Y2 204 aaKnown RBP9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 TOMM20LQ6UXN7 152 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 HSD17B13Q7Z5P4 300 aaPredicted RBP9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 CBR4Q8N4T8 237 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 DCANP1Q8TF63 244 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 PHYHIPQ92561 330 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 GPHA2Q96T91 129 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 DIMT1Q9UNQ2 313 aaKnown RBP9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
NKX3-1-202ENST00000523261 GYG2O15488 501 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 TRAPPC2P0DI81 140 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 TRAPPC2BP0DI82 140 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 NUTF2P61970 127 aaKnown RBP9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 DNAL1Q4LDG9 190 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 TTC32Q5I0X7 151 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 CDPF1Q6NVV7 123 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 GSG1LQ6UXU4 331 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 OR56B1Q8NGI3 324 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 AIFM2Q9BRQ8 373 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 Q9H8V8 135 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 TAS2R8Q9NYW2 309 aa9.67□□□□□ -0.86
NKX3-1-202ENST00000523261 WBP4O75554 376 aaKnown RBP9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 CD1AP06126 327 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 FGF2P09038 288 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 MFAP4P55083 255 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 DAD1P61803 113 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 ICAM4Q14773 271 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 POU2AF1Q16633 256 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 Q6ZS49 121 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 Q9H3A6 140 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 ZFAND3Q9H8U3 227 aa9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
NKX3-1-202ENST00000523261 IGHV3OR16-12A0A075B7B8 117 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 TEX50A0A1B0GTY4 177 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 RPS10-NUDT3A0A1W2PQS6 291 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 NUDT3O95989 172 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 NFYAP23511 347 aaPredicted RBP9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 TXN2Q99757 166 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 CENPOQ9BU64 300 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 TMEM231Q9H6L2 316 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 MED4Q9NPJ6 270 aa9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 YTHDF2Q9Y5A9 579 aaKnown RBP9.65□□□□□ -0.86
NKX3-1-202ENST00000523261 H3BMM0 161 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 I3L2K1 104 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 SLC17A2O00624 439 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 GNRHRP30968 328 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 TAS2R31P59538 309 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 RCN1Q15293 331 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 ACSM3Q53FZ2 586 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 PSMG4Q5JS54 123 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 SSX7Q7RTT5 188 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 SLC25A46Q96AG3 418 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 RAB3CQ96E17 227 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 DCSTAMPQ9H295 470 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 NDUFA4L2Q9NRX3 87 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 TMEM140Q9NV12 185 aa9.64□□□□□ -0.87
NKX3-1-202ENST00000523261 IRGMA1A4Y4 181 aa9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 MFNGO00587 321 aa9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 RBFOX2O43251 390 aaKnown RBP eCLIP9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 ALDH3B2P48448 385 aa9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 HAMPP81172 84 aa9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 USF2Q15853 346 aaPredicted RBP9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 Q6ZRN7 208 aaPredicted RBP9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 SPAG16Q8N0X2 631 aa9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 OR1L8Q8NGR8 309 aa9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 LSM10Q969L4 123 aaKnown RBP9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 SLC7A6OSQ96CW6 309 aaPredicted RBP9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 GFI1Q99684 422 aa9.63□□□□□ -0.87
NKX3-1-202ENST00000523261 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 LOC100130705A0A1B0GUX0 176 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 A0A1W2PPQ1 181 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 HELTA6NFD8 242 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 GNG7O60262 68 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 IGHV3-48P01763 117 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 NQO2P16083 231 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 P2RY1P47900 373 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 OGFRL1Q5TC84 451 aaPredicted RBP9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 TMEM80Q96HE8 168 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 HINT2Q9BX68 163 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 PLGRKTQ9HBL7 147 aa9.62□□□□□ -0.87
NKX3-1-202ENST00000523261 A0A1B0GU03 582 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 A0A1W2PS18 150 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 TNFSF12O43508 249 aa9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 DENRO43583 198 aaKnown RBP9.61□□□□□ -0.87
NKX3-1-202ENST00000523261 IFNA5P01569 189 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms