RNA–Protein interactions for RNA: ENST00000522746.5

FAM49B-223, Transcript of family with sequence similarity 49 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-223	ENST00000522746	LY6L	H3BQJ8	138 aa		13.4	□□□□□ -0.26
FAM49B-223	ENST00000522746	RBMS3	Q6XE24	437 aa	Known RBP	13.4	□□□□□ -0.26
FAM49B-223	ENST00000522746	C17orf50	Q8WW18	174 aa		13.4	□□□□□ -0.26
FAM49B-223	ENST00000522746	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	13.4	□□□□□ -0.26
FAM49B-223	ENST00000522746	CD81	P60033	236 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	B2M	P61769	119 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	ERH	P84090	104 aa	Known RBP	13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	KLRD1	Q13241	179 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	RHEB	Q15382	184 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	STPG3	Q8N7X2	389 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	PLXNB1	O43157	2135 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746		A0A1W2PN81	502 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746		A0A1W2PPV4	95 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	FNDC10	F2Z333	226 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	INS-IGF2	F8WCM5	200 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	SOX15	O60248	233 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	CHRNA7	P36544	502 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	ATP5I	P56385	69 aa	Predicted RBP	13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	GAMT	Q14353	236 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	P2RX4	Q99571	388 aa		13.39	□□□□□ -0.27
FAM49B-223	ENST00000522746	IGKV1OR2-108	A0A075B7D4	117 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746		A0A1W2PPI3	338 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	COLCA2	A8K830	154 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	MEF2B	Q02080	365 aa	Predicted RBP	13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	SLC35E3	Q7Z769	313 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	TEX45	Q8NA69	505 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	IGFBPL1	Q8WX77	278 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	ISOC2	Q96AB3	205 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	NIPSNAP3B	Q9BS92	247 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	CRYGB	P07316	175 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	ZFP36	P26651	326 aa	Known RBP	13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	PSMB3	P49720	205 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	EFNA4	P52798	201 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	CD69	Q07108	199 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	PSG5	Q15238	335 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	HCP5	Q6MZN7	132 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	TMEM144	Q7Z5S9	345 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	OR11H6	Q8NGC7	330 aa		13.38	□□□□□ -0.27
FAM49B-223	ENST00000522746	NAV3	Q8IVL0	2385 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746		M0R1W7	72 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	REG1A	P05451	166 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PAX6	P26367	422 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	RPL29	P47914	159 aa	Known RBP	13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	RAB31	Q13636	194 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PRSS8	Q16651	343 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	TVP23C	Q96ET8	276 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	MANBAL	Q9NQG1	85 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	KCNIP2	Q9NS61	270 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746		A0A1W2PRD5	423 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746		A0A1W2PRF3	423 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746		A0A1W2PRM7	423 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PAGE4	O60829	102 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	HTR1D	P28221	377 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PRR20E	P86478	221 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PRR20C	P86479	221 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PRR20D	P86480	221 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PRR20B	P86481	221 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	PRR20A	P86496	221 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	TNXA	Q16473	311 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	TPTE2P1	Q5T6R2	138 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	ABHD5	Q8WTS1	349 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	SIGLEC9	Q9Y336	463 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	HILPDA	Q9Y5L2	63 aa		13.37	□□□□□ -0.27
FAM49B-223	ENST00000522746	CRYBG3	Q68DQ2	2970 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	TIMM23	O14925	209 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	LINC00869	P0C866	280 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	PRTN3	P24158	256 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	SPATA31B1P	Q5VZV4	182 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	LHFPL4	Q7Z7J7	247 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	MMD2	Q8IY49	270 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	OR2T6	Q8NHC8	308 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	SEPSECS	Q9HD40	501 aa	Known RBP	13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	METTL1	Q9UBP6	276 aa	Known RBP	13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	SLC45A2	Q9UMX9	530 aa		13.36	□□□□□ -0.27
FAM49B-223	ENST00000522746	ARL14EPL	P0DKL9	152 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	APELA	P0DMC3	54 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	TAGLN2	P37802	199 aa	Known RBP	13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	SLC16A13	Q7RTY0	426 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	OR4F5	Q8NH21	305 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	OR4F4	Q96R69	305 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	FBXL15	Q9H469	300 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	DPM3	Q9P2X0	92 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	IGLC7	A0M8Q6	106 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	IGHV2-5	P01817	119 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	STAG3L2	P0CL84	134 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	STAG3L3	P0CL85	134 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	GATA2	P23769	480 aa	Predicted RBP	13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	OR10J1	P30954	320 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	GNB1	P62873	340 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	C15orf54	Q8N8G6	183 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	MED13L	Q71F56	2210 aa		13.35	□□□□□ -0.27
FAM49B-223	ENST00000522746	ZNF727	A8MUV8	499 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	ODF3B	A8MYP8	253 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	IGHV3-48	P01763	117 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	RPL27A	P46776	148 aa	Known RBP	13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	UBE2G2	P60604	165 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	LCN2	P80188	198 aa		13.34	□□□□□ -0.27
FAM49B-223	ENST00000522746	PPP1R27	Q86WC6	154 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms