RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 ZNF546Q86UE3 836 aa10.52□□□□□ -0.72
CLK4-210ENST00000522136 CIB3Q96Q77 187 aaPredicted RBP10.52□□□□□ -0.72
CLK4-210ENST00000522136 P2RX4Q99571 388 aa10.52□□□□□ -0.72
CLK4-210ENST00000522136 INS-IGF2F8WCM5 200 aa10.52□□□□□ -0.73
CLK4-210ENST00000522136 PRH1P02810 166 aa10.52□□□□□ -0.73
CLK4-210ENST00000522136 RNASE2P10153 161 aaKnown RBP10.52□□□□□ -0.73
CLK4-210ENST00000522136 RPL23AP62750 156 aaKnown RBP10.52□□□□□ -0.73
CLK4-210ENST00000522136 TMEM267Q0VDI3 215 aaPredicted RBP10.52□□□□□ -0.73
CLK4-210ENST00000522136 ZFP69Q49AA0 526 aa10.52□□□□□ -0.73
CLK4-210ENST00000522136 ARSJQ5FYB0 599 aaPredicted RBP10.52□□□□□ -0.73
CLK4-210ENST00000522136 TRAV41A0A0B4J266 112 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 IGSF23A1L1A6 192 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 ARPC5O15511 151 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 IGF1P05019 195 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 CRYBA1P05813 215 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 METTL15P1P0C7V9 234 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 CTRB1P17538 263 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 SNCAP37840 140 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 P2RY1P47900 373 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 MFAP2P55001 183 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 TAS2R30P59541 319 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 CTRB2Q6GPI1 263 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 SLC24A4Q8NFF2 622 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 SRSF8Q9BRL6 282 aaKnown RBP10.51□□□□□ -0.73
CLK4-210ENST00000522136 WNT10AQ9GZT5 417 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 LYRM2Q9NU23 88 aaPredicted RBP10.51□□□□□ -0.73
CLK4-210ENST00000522136 NF1P21359 2839 aa10.51□□□□□ -0.73
CLK4-210ENST00000522136 AP4M1O00189 453 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 TSC22D2O75157 780 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 HKR1P10072 659 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 NPY1RP25929 384 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 CRIP2P52943 208 aaPredicted RBP10.5□□□□□ -0.73
CLK4-210ENST00000522136 BSXQ3C1V8 233 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 AKIRIN2Q53H80 203 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 C19orf54Q5BKX5 351 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 NOXA1Q86UR1 476 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 Q8N2B8 174 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 TTC9CQ8N5M4 171 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 TMEM252Q8N6L7 170 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 BSCL2Q96G97 398 aaPredicted RBP10.5□□□□□ -0.73
CLK4-210ENST00000522136 TNFSF18Q9UNG2 199 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 STRAPQ9Y3F4 350 aaKnown RBP10.5□□□□□ -0.73
CLK4-210ENST00000522136 DMRT1Q9Y5R6 373 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 U3KQ87 197 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 SOX15O60248 233 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 FBXO24O75426 580 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 CST7O76096 145 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 RPL12P30050 165 aaKnown RBP10.5□□□□□ -0.73
CLK4-210ENST00000522136 HTR2BP41595 481 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 AP2S1P53680 142 aaPredicted RBP10.5□□□□□ -0.73
CLK4-210ENST00000522136 NHLH2Q02577 135 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 ARL16Q0P5N6 197 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 HSD17B13Q7Z5P4 300 aaPredicted RBP10.5□□□□□ -0.73
CLK4-210ENST00000522136 STPG2Q8N412 459 aa10.5□□□□□ -0.73
CLK4-210ENST00000522136 JMJD1CQ15652 2540 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 RNF222A6NCQ9 220 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 CRYGCP07315 174 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 DEFA4P12838 97 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 EIF2B2P49770 351 aaKnown RBP10.49□□□□□ -0.73
CLK4-210ENST00000522136 DEFA5Q01523 94 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 OR8G2PQ6IF36 304 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 TMEM65Q6PI78 240 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 C10orf99Q6UWK7 81 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 TMEM14EPQ6UXP3 125 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 ZNF329Q86UD4 541 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 HAPLN4Q86UW8 402 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 MRPL41Q8IXM3 137 aaKnown RBP10.49□□□□□ -0.73
CLK4-210ENST00000522136 SERTAD4Q9NUC0 356 aa10.49□□□□□ -0.73
CLK4-210ENST00000522136 F11RQ9Y624 299 aaKnown RBP10.49□□□□□ -0.73
CLK4-210ENST00000522136 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
CLK4-210ENST00000522136 NPIPB5A8MRT5 1133 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 TSPAN9O75954 239 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 IFNA4P05014 189 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 CXCL2P19875 107 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 PPIFP30405 207 aaKnown RBP10.48□□□□□ -0.73
CLK4-210ENST00000522136 EWSR1Q01844 656 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLK4-210ENST00000522136 MLANAQ16655 118 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 C2orf83Q53S99 150 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 SLC25A24Q6NUK1 477 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 TMEM217Q8N7C4 229 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 FAM110DQ8TAY7 271 aaPredicted RBP10.48□□□□□ -0.73
CLK4-210ENST00000522136 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 MFFQ9GZY8 342 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 PMS2P5A8MQ11 134 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 HMSDA8MTL9 139 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 LY86O95711 162 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 HNRNPCP07910 306 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLK4-210ENST00000522136 OR8U8P0C7N1 319 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 RPP30P78346 268 aaKnown RBP10.48□□□□□ -0.73
CLK4-210ENST00000522136 ETV3LQ6ZN32 361 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 INO80EQ8NBZ0 244 aaPredicted RBP10.48□□□□□ -0.73
CLK4-210ENST00000522136 ZNF114Q8NC26 417 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 OR1P1Q8NH06 330 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 OR2T6Q8NHC8 308 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 MISP3Q96FF7 219 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 MS4A10Q96PG2 267 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 FANCD2OSQ96PS1 177 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 ZC4H2Q9NQZ6 224 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 ZNF355PQ9NSJ1 428 aa10.48□□□□□ -0.73
CLK4-210ENST00000522136 C2CD3Q4AC94 2353 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms