RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 EFCAB11Q9BUY7 163 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 TSSK6Q9BXA6 273 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 NDEL1Q9GZM8 345 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC22A4Q9H015 551 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 C11orf49Q9H6J7 331 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 TRIM45Q9H8W5 580 aaPredicted RBP1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 TXNL4BQ9NX01 149 aaKnown RBP1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 PAQR5Q9NXK6 330 aaPredicted RBP1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNF230Q9UIE0 474 aaPredicted RBP1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 ASB4Q9Y574 426 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 ALG5Q9Y673 324 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 ESPL1Q14674 2120 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 ALPK2Q86TB3 2170 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 F5P12259 2224 aa1.79□□□□□ -2.12
HMGN1P28-201ENST00000521340 PCNTO95613 3336 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ASCC3Q8N3C0 2202 aaKnown RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ASXL3Q9C0F0 2248 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 CACNA1DQ01668 2161 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 KIAA2026Q5HYC2 2103 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 CHD3Q12873 2000 aaKnown RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 TRAV8-2A0A0B4J237 113 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 TRDV1A0A1B0GX56 115 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 IRGMA1A4Y4 181 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 C4orf51C9J302 202 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 G3V3Q6 166 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 H3BQ85 93 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 J3QRE1 110 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 PHYHO14832 338 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 LYRM1O43325 122 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 TRGV3P03979 118 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 PTHLHP12272 177 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNF3P17036 446 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 CFL1P23528 166 aaKnown RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 PSMA1P25786 263 aaKnown RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 SDC2P34741 201 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 EVI2BP34910 448 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ARPC4P59998 168 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 RRAS2P62070 204 aaPredicted RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 FABP5Q01469 135 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 C1DQ13901 141 aaKnown RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 MMDQ15546 238 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNF791Q3KP31 576 aaPredicted RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 CST9Q5W186 159 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 TRIQKQ629K1 86 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 TNFAIP8L2Q6P589 184 aaPredicted RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 CASP12Q6UXS9 341 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ZNF767PQ75MW2 155 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 PLCZ1Q86YW0 608 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 RPRMLQ8N4K4 120 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 LINC00471Q8N535 108 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 C2orf73Q8N5S3 287 aaPredicted RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 TBC1D19Q8N5T2 526 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 YIPF7Q8N8F6 280 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 LFNGQ8NES3 379 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ATP6V1C2Q8NEY4 427 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 OR9Q1Q8NGQ5 310 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 TEX47Q8TBZ9 253 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 SKA2Q8WVK7 121 aaPredicted RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 AP3S1Q92572 193 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC35G5Q96KT7 338 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 KCTD7Q96MP8 289 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 WFDC6Q9BQY6 131 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 POTEKPQ9BYX7 375 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 AICDAQ9GZX7 198 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 ALX4Q9H161 411 aaPredicted RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 BCL2L10Q9HD36 194 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 SSR3Q9UNL2 185 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 C14orf166Q9Y224 244 aaKnown RBP1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 SLC22A7Q9Y694 548 aa1.78□□□□□ -2.12
HMGN1P28-201ENST00000521340 CACNA1EQ15878 2313 aa1.78□□□□□ -2.13
HMGN1P28-201ENST00000521340 UNC13CQ8NB66 2214 aa1.78□□□□□ -2.13
HMGN1P28-201ENST00000521340 PTPRBP23467 1997 aa1.78□□□□□ -2.13
HMGN1P28-201ENST00000521340 DOCK10Q96BY6 2186 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 A0A087WUU8 490 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 IGHV1-45A0A0A0MS14 117 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 IGHV3-21A0A0B4J1V1 117 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 IGKV1-12A0A0C4DH73 117 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 LOC105371267A0A1B0GV96 52 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 A0A1W2PQL4 384 aaPredicted RBP1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 LINC00862A6NCI5 91 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 LEUTXA8MZ59 168 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 C5orf58C9J3I9 102 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 FTCDNL1E5RQL4 147 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 F5H5K5 113 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 RGS5O15539 181 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 CHP2O43745 196 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 ORC5O43913 435 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 HPGDSO60760 199 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 POP7O75817 140 aaKnown RBP1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 CRYZL1O95825 349 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 NRASP01111 189 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 HRASP01112 189 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 KRASP01116 189 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 LTAP01374 205 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 IGKV1D-12P01611 117 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 HLA-AP01891 365 aaKnown RBP1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 PFN1P07737 140 aaKnown RBP1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 TSPAN19P0C672 248 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 MYL12AP19105 171 aa1.77□□□□□ -2.13
HMGN1P28-201ENST00000521340 RPS4Y1P22090 263 aaKnown RBP1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms