RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 RNASE10Q5GAN6 216 aaKnown RBP12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 LAMTOR1Q6IAA8 161 aa12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 OR5B3Q8NH48 314 aa12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 SCARB1Q8WTV0 552 aa12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 TMEM190Q8WZ59 177 aa12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 CMTM3Q96MX0 182 aa12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 DAZ1Q9NQZ3 744 aaKnown RBP12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 EXTL2Q9UBQ6 330 aa12.11□□□□□ -0.47
IGHV3-42-201ENST00000520410 PI3P19957 117 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 ELLP55199 621 aaPredicted RBP12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 KLK9Q2XQG4 91 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 SPINK9Q5DT21 86 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 SPSB3Q6PJ21 355 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 OR2C3Q8N628 320 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 IL17DQ8TAD2 202 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 CHRDL1Q9BU40 450 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 PDCD10Q9BUL8 212 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 ZNF436Q9C0F3 470 aaPredicted RBP12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 NAA50Q9GZZ1 169 aaKnown RBP12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 KLK9Q9UKQ9 250 aa12.1□□□□□ -0.47
IGHV3-42-201ENST00000520410 TRAV25A0A0B4J276 109 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 LCE6AA0A183 80 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 DBX1A6NMT0 343 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 NDUFA4O00483 81 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 NUPL2O15504 423 aaKnown RBP12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 RGS5O15539 181 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 MFAP2P55001 183 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 TRIM16LQ309B1 348 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 SCGB2B2Q4G0G5 96 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 GPR107Q5VW38 600 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 LINC00322Q6ZN03 302 aaPredicted RBP12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 SLC35G3Q8N808 338 aa12.09□□□□□ -0.47
IGHV3-42-201ENST00000520410 IGKV3-7A0A075B6H7 116 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 IGHV3-49A0A0A0MS15 119 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 JTBO76095 146 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 TFPI2P48307 235 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 RELQ04864 619 aaPredicted RBP12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 SPAG8Q99932 426 aaPredicted RBP12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 C5orf66Q9H5L9 145 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 TMEM14BQ9NUH8 114 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 KLK11Q9UBX7 282 aa12.08□□□□□ -0.48
IGHV3-42-201ENST00000520410 OR4C46A6NHA9 309 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 K7EIM0 57 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 GNG7O60262 68 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 IFNA17P01571 189 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 CD3DP04234 171 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 ZNF182P17025 639 aaPredicted RBP12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 HOXA1P49639 335 aaPredicted RBP12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 MFAP4P55083 255 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 UCP3P55916 312 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 PIGPP57054 158 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 IZUMO4Q1ZYL8 232 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 OR1P1Q8NH06 330 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 OR52I2Q8NH67 350 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 SEC22AQ96IW7 307 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 COPZ2Q9P299 210 aa12.07□□□□□ -0.48
IGHV3-42-201ENST00000520410 ATG12O94817 140 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 MT-CO2P00403 227 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 IGKV1-39P01597 117 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 IGKV1D-39P04432 117 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 CTSDP07339 412 aaPredicted RBP12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 C8orf88P0DMB2 117 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 RPL35AP18077 110 aaKnown RBP12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 SNCAP37840 140 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 APOC4P55056 127 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 PRCDQ00LT1 54 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 CCDC71LQ8N9Z2 235 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 ENY2Q9NPA8 101 aa12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 FAM212BQ9NTI7 297 aaPredicted RBP12.06□□□□□ -0.48
IGHV3-42-201ENST00000520410 STAB2Q8WWQ8 2551 aa12.05□□□□□ -0.48
IGHV3-42-201ENST00000520410 IGHV3OR16-13A0A075B7E8 117 aa12.05□□□□□ -0.48
IGHV3-42-201ENST00000520410 IGHV3-74A0A0B4J1X5 117 aa12.05□□□□□ -0.48
IGHV3-42-201ENST00000520410 GABARAPO95166 117 aa12.05□□□□□ -0.48
IGHV3-42-201ENST00000520410 HSPE1P61604 102 aaKnown RBP12.05□□□□□ -0.48
IGHV3-42-201ENST00000520410 PMS2P11Q13670 270 aa12.05□□□□□ -0.48
IGHV3-42-201ENST00000520410 GPR141Q7Z602 305 aa12.05□□□□□ -0.48
IGHV3-42-201ENST00000520410 RYR3Q15413 4870 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 C3orf85A0A1B0GTC6 90 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 TSPAN4O14817 238 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 RAB3DO95716 219 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 SMIM18P0DKX4 95 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 ADMP35318 185 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 TAS2R19P59542 299 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 DEFB135Q30KP9 77 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 SP6Q3SY56 376 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 ARRDC1Q8N5I2 433 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 TMEM116Q8NCL8 245 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 ZFAND1Q8TCF1 268 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 C15orf40Q8WUR7 153 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 RRNAD1Q96FB5 475 aaKnown RBP12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 ZNF486Q96H40 463 aaPredicted RBP12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 TP53RKQ96S44 253 aa12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 C14orf166Q9Y224 244 aaKnown RBP12.04□□□□□ -0.48
IGHV3-42-201ENST00000520410 CXorf65A6NEN9 183 aa12.03□□□□□ -0.48
IGHV3-42-201ENST00000520410 C15orf62A8K5M9 175 aa12.03□□□□□ -0.48
IGHV3-42-201ENST00000520410 F8W735 103 aaPredicted RBP12.03□□□□□ -0.48
IGHV3-42-201ENST00000520410 CTSGP08311 255 aa12.03□□□□□ -0.48
IGHV3-42-201ENST00000520410 CTF1Q16619 201 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms