RNA–Protein interactions for RNA: ENST00000520399.1

ERGIC1-208, Transcript of endoplasmic reticulum-golgi intermediate compartment 1, humanhuman

TSL 1 (best)

Gene ERGIC1, Length 5,687 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC1-208ENST00000520399 CD5P06127 495 aa10.3□□□□□ -0.76
ERGIC1-208ENST00000520399 CDCP2Q5VXM1 449 aa10.3□□□□□ -0.76
ERGIC1-208ENST00000520399 A0A0G2JLM5 398 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 NAPSAO96009 420 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 MPZP25189 248 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 RPL8P62917 257 aaKnown RBP10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 ST6GALNAC6Q969X2 333 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 SDF2L1Q9HCN8 221 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 IDI2-AS1Q9NZ38 188 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 PGLYRP1O75594 196 aaPredicted RBP10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 TBX6O95947 436 aaPredicted RBP10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 TMEM42Q69YG0 159 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 ITLN2Q8WWU7 325 aaPredicted RBP10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 GGTLC3B5MD39 225 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 TMEM50AO95807 157 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 SRSF6Q13247 344 aaKnown RBP10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 SLC25A53Q5H9E4 307 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 TGFAP01135 160 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 RPS11P62280 158 aaKnown RBP eCLIP10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 HCP5Q6MZN7 132 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 MS4A6AQ9H2W1 248 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 TRPM6Q9BX84 2022 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 PDLIM4P50479 330 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 VKORC1L1Q8N0U8 176 aa10.29□□□□□ -0.76
ERGIC1-208ENST00000520399 TRGV2A0A075B6R0 118 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 CBLN1P23435 193 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 PATJQ8NI35 1801 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 A8MWV9 139 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 PIN1P1O15428 100 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 IGKV3-20P01619 116 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 SAA1P0DJI8 122 aaPredicted RBP10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 MPV17P39210 176 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 SRSF3P84103 164 aaKnown RBP10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 RNF222A6NCQ9 220 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 AZU1P20160 251 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 CD69Q07108 199 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 S100A7L2Q5SY68 101 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 ZNF826PQ6ZT77 177 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 BIVMQ86UB2 503 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 LINC01587Q99440 93 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 SS18L2Q9UHA2 77 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 PGPEP1LA6NFU8 196 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 FAM89BQ8N5H3 189 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 CCL19Q99731 98 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 MRPL32Q9BYC8 188 aaKnown RBP10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 DLL3Q9NYJ7 618 aa10.28□□□□□ -0.76
ERGIC1-208ENST00000520399 EGR4Q05215 589 aa10.27□□□□□ -0.76
ERGIC1-208ENST00000520399 PMVKQ15126 192 aa10.27□□□□□ -0.76
ERGIC1-208ENST00000520399 TMEM252Q8N6L7 170 aa10.27□□□□□ -0.76
ERGIC1-208ENST00000520399 Q96M66 194 aa10.27□□□□□ -0.76
ERGIC1-208ENST00000520399 FOXD3Q9UJU5 478 aaPredicted RBP10.27□□□□□ -0.76
ERGIC1-208ENST00000520399 F8VVB4 439 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 F8VWA3 439 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 CD300EQ496F6 205 aaPredicted RBP10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 LINC01590Q5TEZ4 76 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 GDF15Q99988 308 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 FOXI3A8MTJ6 420 aaPredicted RBP10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 PAX1P15863 534 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 RND2P52198 227 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 LAIR2Q6ISS4 152 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 NPIPB13A6NJU9 1138 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 VWC2LB2RUY7 222 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 NPIPB4C9JG80 1138 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 TIAF1O95411 115 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 SMIM20Q8N5G0 67 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 LOC101059948A0A1B0GTJ6 334 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 TMEM86BQ8N661 226 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 SFXN3Q9BWM7 321 aa10.27□□□□□ -0.77
ERGIC1-208ENST00000520399 MYO9BQ13459 2157 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 IGHV3-72A0A0B4J1Y9 119 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 NPIPB11E5RHQ5 1161 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 IGHV2-5P01817 119 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 RUNX1Q01196 453 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 FXYD3Q14802 87 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 KLF14Q8TD94 323 aaPredicted RBP10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 PLPPR1Q8TBJ4 325 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 ZNF479Q96JC4 524 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 C19orf24Q9BVV8 132 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 PEMTQ9UBM1 199 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 TOMM40O96008 361 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 C8orf88P0DMB2 117 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 HOXD3P31249 432 aaPredicted RBP10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 C9orf153Q5TBE3 101 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 ATP1A1-AS1Q5TC04 95 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 GPR146Q96CH1 333 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 CALYQ9NYX4 217 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 IL36BQ9NZH7 164 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 TRAV5A0A0B4J249 113 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 GAGE12JA6NER3 117 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 SMAD7O15105 426 aaKnown RBP10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 GAGE7O76087 117 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 GAGE12FP0CL80 117 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 GAGE12GP0CL81 117 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 GAGE12IP0CL82 117 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 GAGE4Q13068 117 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 MGST2Q99735 147 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 PTPRFP10586 1907 aa10.26□□□□□ -0.77
ERGIC1-208ENST00000520399 ZFC3H1O60293 1989 aaKnown RBP10.25□□□□□ -0.77
ERGIC1-208ENST00000520399 OR10J3Q5JRS4 329 aa10.25□□□□□ -0.77
ERGIC1-208ENST00000520399 C19orf48Q6RUI8 117 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms