RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 SVBPQ8N300 66 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 TNFRSF14Q92956 283 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 RCC1LQ96I51 464 aaKnown RBP6.4□□□□□ -1.38
CLK4-203ENST00000519583 RARRES2Q99969 163 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 PCGF1Q9BSM1 259 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 PBDC1Q9BVG4 233 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 NPCDR1Q9BY65 106 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 PLEKHA3Q9HB20 300 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 TIMM9Q9Y5J7 89 aa6.4□□□□□ -1.38
CLK4-203ENST00000519583 NIPBLQ6KC79 2804 aaeCLIP6.4□□□□□ -1.38
CLK4-203ENST00000519583 TEX50A0A1B0GTY4 177 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 CA2P00918 260 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 HOXB4P17483 251 aaPredicted RBP6.4□□□□□ -1.39
CLK4-203ENST00000519583 M6PRP20645 277 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 CD1BP29016 333 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 RAB13P51153 203 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 PRCDQ00LT1 54 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 LCN15Q6UWW0 184 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 PNKDQ8N490 385 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 SUN5Q8TC36 379 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 RITA1Q96K30 269 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 ZNF257Q9Y2Q1 563 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 TET2Q6N021 2002 aaPredicted RBP6.4□□□□□ -1.39
CLK4-203ENST00000519583 hCG_1809904A0A1W2PP81 198 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 A0A1W2PPE2 198 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 A0A1W2PR64 198 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 A0A1W2PRV1 198 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 BTBD17A6NE02 478 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 PRSS46E5RG02 174 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 BUB1B-PAK6H3BSN5 160 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 SCAF4O95104 1147 aaKnown RBP6.4□□□□□ -1.39
CLK4-203ENST00000519583 IGKV1D-33P01593 117 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 IGKV1-33P01594 117 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 IGLV2-23P01705 113 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 RAB11AP62491 216 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 HAGHQ16775 308 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 CENPVQ7Z7K6 275 aaPredicted RBP6.4□□□□□ -1.39
CLK4-203ENST00000519583 TEX29Q8N6K0 151 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 Q8N7P7 452 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 OR4P4Q8NGL7 312 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 NANPQ8TBE9 248 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 NKX6-2Q9C056 277 aaPredicted RBP6.4□□□□□ -1.39
CLK4-203ENST00000519583 SIRT7Q9NRC8 400 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 KIAA1456Q9P272 454 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 WDR83OSQ9Y284 106 aa6.4□□□□□ -1.39
CLK4-203ENST00000519583 NUPL2O15504 423 aaKnown RBP6.39□□□□□ -1.39
CLK4-203ENST00000519583 HBE1P02100 147 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 MDKP21741 143 aaPredicted RBP6.39□□□□□ -1.39
CLK4-203ENST00000519583 FGF8P55075 233 aaPredicted RBP6.39□□□□□ -1.39
CLK4-203ENST00000519583 RPL8P62917 257 aaKnown RBP6.39□□□□□ -1.39
CLK4-203ENST00000519583 FFAR4Q5NUL3 377 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 ZNF709Q8N972 641 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 BEND2Q8NDZ0 799 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 FKBP11Q9NYL4 201 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 IGHV3OR16-10A0A075B7F0 116 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 RBFOX3A6NFN3 312 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 SLC25A17O43808 307 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 MC5RP33032 325 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 C10orf55Q5SWW7 151 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 MOB3BQ86TA1 216 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 OR10W1Q8NGF6 305 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 OR5B3Q8NH48 314 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 TMEM167AQ8TBQ9 72 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 COMMD5Q9GZQ3 224 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 TPSG1Q9NRR2 321 aa6.39□□□□□ -1.39
CLK4-203ENST00000519583 TRAV1-1A0A0B4J248 108 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 IGHV1-3A0A0C4DH29 117 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 A0A1B0GW64 132 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 FAM74A7A6NL05 159 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 TOX4O94842 621 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 NPBWR1P48145 328 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 RIPPLY3P57055 190 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 DLK1P80370 383 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 KLRD1Q13241 179 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 FAM74A3Q4VXF1 159 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 RPP25LQ8N5L8 163 aaKnown RBP6.38□□□□□ -1.39
CLK4-203ENST00000519583 VSTM2AQ8TAG5 236 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 RPEQ96AT9 228 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 SLC25A22Q9H936 323 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 TRAV40A0A0B4J280 105 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 MAP1LC3B2A6NCE7 125 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 OR13C7P0DN81 318 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 VMA21Q3ZAQ7 101 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 TREML4Q6UXN2 200 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 OR1L8Q8NGR8 309 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 MBD3L1Q8WWY6 194 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 C22orf15Q8WYQ4 148 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 GGACTQ9BVM4 153 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 MAP1LC3BQ9GZQ8 125 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 ZNF430Q9H8G1 570 aaPredicted RBP6.38□□□□□ -1.39
CLK4-203ENST00000519583 GNG13Q9P2W3 67 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 AMMECR1Q9Y4X0 333 aaPredicted RBP6.38□□□□□ -1.39
CLK4-203ENST00000519583 KPTNQ9Y664 436 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 E7EUB6 86 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 C17orf112F2Z3M2 114 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 HMGB3O15347 200 aaKnown RBP6.38□□□□□ -1.39
CLK4-203ENST00000519583 DEFA4P12838 97 aa6.38□□□□□ -1.39
CLK4-203ENST00000519583 ARSJQ5FYB0 599 aaPredicted RBP6.38□□□□□ -1.39
CLK4-203ENST00000519583 LDLRAD2Q5SZI1 272 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms