RNA–Protein interactions for RNA: ENST00000519321.5

SKP1-206, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-206ENST00000519321 IGLV11-55A0A075B6I3 123 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 C9orf170A2RU37 121 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 LINC01619G3V211 115 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 HLA-AP01891 365 aaKnown RBP17.48■□□□□ 0.39
SKP1-206ENST00000519321 OR4E1P0C645 316 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 SULT1A3P0DMM9 295 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 SULT1A4P0DMN0 295 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 ZNF343Q6P1L6 599 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 Q6ZRM9 215 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 LYZL2Q7Z4W2 148 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 DUX3Q96PT4 197 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 ALX4Q9H161 411 aaPredicted RBP17.48■□□□□ 0.39
SKP1-206ENST00000519321 CACNG5Q9UF02 275 aa17.48■□□□□ 0.39
SKP1-206ENST00000519321 TRRAPQ9Y4A5 3859 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 INS-IGF2F8WCM5 200 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 DUS4LO95620 317 aaKnown RBP17.47■□□□□ 0.39
SKP1-206ENST00000519321 DEFA1P59665 94 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 DEFA3P59666 94 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 SPCS3P61009 180 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 C15orf32Q32M92 178 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 ANKRD55Q3KP44 614 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 C4orf46Q504U0 113 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 NMSQ5H8A3 153 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 LYG2Q86SG7 212 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 OR2C3Q8N628 320 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 COQ8AQ8NI60 647 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 RCC1LQ96I51 464 aaKnown RBP17.47■□□□□ 0.39
SKP1-206ENST00000519321 MCRIP2Q9BUT9 160 aaKnown RBP17.47■□□□□ 0.39
SKP1-206ENST00000519321 ENY2Q9NPA8 101 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 TMED3Q9Y3Q3 217 aa17.47■□□□□ 0.39
SKP1-206ENST00000519321 F11RQ9Y624 299 aaKnown RBP17.47■□□□□ 0.39
SKP1-206ENST00000519321 ANXA7P20073 488 aaKnown RBP17.46■□□□□ 0.39
SKP1-206ENST00000519321 DHRS2Q13268 280 aa17.46■□□□□ 0.39
SKP1-206ENST00000519321 EXOSC2Q13868 293 aaKnown RBP17.46■□□□□ 0.39
SKP1-206ENST00000519321 C19orf35Q6ZS72 473 aa17.46■□□□□ 0.39
SKP1-206ENST00000519321 CXorf58Q96LI9 332 aa17.46■□□□□ 0.39
SKP1-206ENST00000519321 PEF1Q9UBV8 284 aaKnown RBP17.46■□□□□ 0.39
SKP1-206ENST00000519321 A0A1B0GU03 582 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 HOXA1P49639 335 aaPredicted RBP17.45■□□□□ 0.38
SKP1-206ENST00000519321 DEFA5Q01523 94 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 SMCO1Q147U7 214 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 PDLIM3Q53GG5 364 aaPredicted RBP17.45■□□□□ 0.38
SKP1-206ENST00000519321 SLC25A24Q6NUK1 477 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 ZNF114Q8NC26 417 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 OR1P1Q8NH06 330 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 ENKURQ8TC29 256 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 GPR61Q9BZJ8 451 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 NUDT15Q9NV35 164 aa17.45■□□□□ 0.38
SKP1-206ENST00000519321 IGHV4OR15-8A0A075B7B6 117 aa17.44■□□□□ 0.38
SKP1-206ENST00000519321 A0A087WW49 117 aa17.44■□□□□ 0.38
SKP1-206ENST00000519321 H2AFB2P0C5Z0 115 aa17.44■□□□□ 0.38
SKP1-206ENST00000519321 SLC25A6P12236 298 aa17.44■□□□□ 0.38
SKP1-206ENST00000519321 ZP3P21754 424 aa17.44■□□□□ 0.38
SKP1-206ENST00000519321 EEF1AKMT3Q96AZ1 226 aa17.44■□□□□ 0.38
SKP1-206ENST00000519321 TRAV6A0A075B6T7 132 aa17.43■□□□□ 0.38
SKP1-206ENST00000519321 ANKRD34BA5PLL1 514 aa17.43■□□□□ 0.38
SKP1-206ENST00000519321 NDUFB8O95169 186 aa17.43■□□□□ 0.38
SKP1-206ENST00000519321 SNCAP37840 140 aa17.43■□□□□ 0.38
SKP1-206ENST00000519321 SUB1P53999 127 aaKnown RBP eCLIP17.43■□□□□ 0.38
SKP1-206ENST00000519321 IFITM3Q01628 133 aa17.43■□□□□ 0.38
SKP1-206ENST00000519321 MGAM2Q2M2H8 2515 aa17.42■□□□□ 0.38
SKP1-206ENST00000519321 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.42■□□□□ 0.38
SKP1-206ENST00000519321 TRBV7-1A0A0A6YYK4 115 aa17.42■□□□□ 0.38
SKP1-206ENST00000519321 SPINK9Q5DT21 86 aa17.42■□□□□ 0.38
SKP1-206ENST00000519321 OR1S1Q8NH92 325 aa17.42■□□□□ 0.38
SKP1-206ENST00000519321 VN1R17PQ8TDU5 208 aa17.42■□□□□ 0.38
SKP1-206ENST00000519321 VWFP04275 2813 aa17.41■□□□□ 0.38
SKP1-206ENST00000519321 CEBPZOSA8MTT3 80 aa17.41■□□□□ 0.38
SKP1-206ENST00000519321 DMRT1Q9Y5R6 373 aa17.41■□□□□ 0.38
SKP1-206ENST00000519321 IFNA21P01568 189 aa17.4■□□□□ 0.38
SKP1-206ENST00000519321 HOXB5P09067 269 aa17.4■□□□□ 0.38
SKP1-206ENST00000519321 DUSP18Q8NEJ0 188 aa17.4■□□□□ 0.38
SKP1-206ENST00000519321 MITD1Q8WV92 249 aa17.4■□□□□ 0.38
SKP1-206ENST00000519321 ATP6V0BQ99437 205 aa17.4■□□□□ 0.38
SKP1-206ENST00000519321 HIPK2Q9H2X6 1198 aa17.4■□□□□ 0.38
SKP1-206ENST00000519321 HSPB7Q9UBY9 170 aa17.4■□□□□ 0.38
SKP1-206ENST00000519321 PKD1L1Q8TDX9 2849 aa17.39■□□□□ 0.38
SKP1-206ENST00000519321 OVOL1O14753 267 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 IGLL1P15814 213 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 HOXD3P31249 432 aaPredicted RBP17.39■□□□□ 0.37
SKP1-206ENST00000519321 SLURP1P55000 103 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 MFAP2P55001 183 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 TNFRSF9Q07011 255 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 TATDN3Q17R31 274 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 SAMD5Q5TGI4 173 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 GGNBP1Q5YKI7 109 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 DCUN1D4Q92564 292 aa17.39■□□□□ 0.37
SKP1-206ENST00000519321 HEYLQ9NQ87 328 aaPredicted RBP17.39■□□□□ 0.37
SKP1-206ENST00000519321 MFSD2BA6NFX1 497 aa17.38■□□□□ 0.37
SKP1-206ENST00000519321 FAM90A26D6RGX4 464 aa17.38■□□□□ 0.37
SKP1-206ENST00000519321 CORTO00230 105 aa17.38■□□□□ 0.37
SKP1-206ENST00000519321 PITX3O75364 302 aa17.38■□□□□ 0.37
SKP1-206ENST00000519321 HTR2BP41595 481 aa17.38■□□□□ 0.37
SKP1-206ENST00000519321 RPEL1Q2QD12 228 aa17.38■□□□□ 0.37
SKP1-206ENST00000519321 NRARPQ7Z6K4 114 aa17.38■□□□□ 0.37
SKP1-206ENST00000519321 DLX4Q92988 240 aaPredicted RBP17.38■□□□□ 0.37
SKP1-206ENST00000519321 GGCTO75223 188 aaKnown RBP17.37■□□□□ 0.37
SKP1-206ENST00000519321 TRBV12-3P01733 135 aa17.37■□□□□ 0.37
SKP1-206ENST00000519321 PLET1Q6UQ28 207 aa17.37■□□□□ 0.37
SKP1-206ENST00000519321 CLEC19AQ6UXS0 136 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms