RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 MADCAM1Q13477 382 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 RAB31Q13636 194 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR4D1Q15615 310 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR10J3Q5JRS4 329 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 CDKL4Q5MAI5 379 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 MINOS1Q5TGZ0 78 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF660Q6AZW8 331 aaPredicted RBP1.99□□□□□ -2.09
CPNE3-204ENST00000517862 C6orf120Q7Z4R8 191 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR5AS1Q8N127 324 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 LGI3Q8N145 548 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 C10orf111Q8N326 155 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR8G5Q8NG78 346 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR10G4Q8NGN3 311 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 OR9Q1Q8NGQ5 310 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 DYNLRB2Q8TF09 96 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 IFT81Q8WYA0 676 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 KCTD7Q96MP8 289 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 BIRC8Q96P09 236 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 TBL1YQ9BQ87 522 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 SAMD10Q9BYL1 202 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 C12orf10Q9HB07 376 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 AP3M1Q9Y2T2 418 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 SNX24Q9Y343 169 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 ORC6Q9Y5N6 252 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 MINOS1-NBL1R4GNA1 71 aa1.99□□□□□ -2.09
CPNE3-204ENST00000517862 TRAV3A0A0B4J244 114 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 TRAV8-6A0A0B4J262 113 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 TRAV26-2A0A0B4J265 109 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 C5orf49A4QMS7 147 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF705GA8MUZ8 300 aaPredicted RBP1.98□□□□□ -2.09
CPNE3-204ENST00000517862 H3BQV1 296 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 CDIPTO14735 213 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 SRSF10O75494 262 aaKnown RBP1.98□□□□□ -2.09
CPNE3-204ENST00000517862 IGHV3-11P01762 117 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 C8GP07360 202 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 HTN3P15516 51 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF823P16415 610 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 DTYMKP23919 212 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 CXCR1P25024 350 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 MTPNP58546 118 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 C2orf54Q08AI8 447 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 MAPRE2Q15555 327 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 TRAM1Q15629 374 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 MPPED2Q15777 294 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 BSXQ3C1V8 233 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 SSX7Q7RTT5 188 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 FUNDC1Q8IVP5 155 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 SLC7A5P1Q8MH63 180 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 UBAC2Q8NBM4 344 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 OR13D1Q8NGV5 346 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 OR5K1Q8NHB7 308 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 PTX4Q96A99 478 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 CMBLQ96DG6 245 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF799Q96GE5 643 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 VAT1Q99536 393 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 TEAD3Q99594 435 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 HSD17B10Q99714 261 aaKnown RBP1.98□□□□□ -2.09
CPNE3-204ENST00000517862 WFDC6Q9BQY6 131 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 SULT4A1Q9BR01 284 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 CHST5Q9GZS9 411 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 UBQLN4Q9NRR5 601 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 PARVAQ9NVD7 372 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 ACOT9Q9Y305 439 aa1.98□□□□□ -2.09
CPNE3-204ENST00000517862 IGLV11-55A0A075B6I3 123 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 IGHV3-66A0A0C4DH42 116 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 A0A1B0GVX0 72 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 A0A1W2PQD3 144 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 KRBOX1C9JBD0 128 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 M0R1X1 148 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF593O00488 134 aaPredicted RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 PLPP3O14495 311 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 FGF16O43320 207 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 GATCO43716 136 aaKnown RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 E2F6O75461 281 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF324O75467 553 aaPredicted RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 UPK1BO75841 260 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ELK1P19419 428 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 TAC1P20366 129 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 HTR1DP28221 377 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 GABRA3P34903 492 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ANP32AP39687 249 aaKnown RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 TSPAN5P62079 268 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 CKAP4Q07065 602 aaKnown RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 FLOT2Q14254 428 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 INSL4Q14641 139 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 PMVKQ15126 192 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 EXOC3L4Q17RC7 722 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 SMUG1Q53HV7 270 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 MTERF4Q7Z6M4 381 aaKnown RBP1.97□□□□□ -2.09
CPNE3-204ENST00000517862 CPNE9Q8IYJ1 553 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 GAPTQ8N292 157 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 OR11H6Q8NGC7 330 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 OR10Z1Q8NGY1 313 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 OR5W2Q8NH69 310 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 ZNF675Q8TD23 568 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 LRRC45Q96CN5 670 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 PHYHIPLQ96FC7 376 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 SLC35E1Q96K37 410 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 OLFM3Q96PB7 478 aa1.97□□□□□ -2.09
CPNE3-204ENST00000517862 SPACA5Q96QH8 159 aa1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms