RNA–Protein interactions for RNA: ENST00000517138.1

SCARNA1-201, small Cajal body-specific RNA 1, humanhuman

BASIC

Gene SCARNA1, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA1-201ENST00000517138 DNAH5Q8TE73 4624 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 F5H5K5 113 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 ORC5O43913 435 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 BRI3O95415 125 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 ASIPP42127 132 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 DAD1P61803 113 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 STX3Q13277 289 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 USF2Q15853 346 aaPredicted RBP0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 KRTAP19-6Q3LI70 58 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 OR13C8Q8NGS7 320 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 REG4Q9BYZ8 158 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 EIF5A2Q9GZV4 153 aaKnown RBP0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 CACNA1CQ13936 2221 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 CCDC88AQ3V6T2 1871 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 C1orf167Q5SNV9 1468 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 LRRC9Q6ZRR7 1453 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 WDR97A6NE52 1622 aa0.35□□□□□ -2.35
SCARNA1-201ENST00000517138 RGPD3A6NKT7 1758 aaPredicted RBP0.34□□□□□ -2.35
SCARNA1-201ENST00000517138 RGPD4Q7Z3J3 1758 aa0.34□□□□□ -2.35
SCARNA1-201ENST00000517138 APOBP04114 4563 aaKnown RBP0.34□□□□□ -2.35
SCARNA1-201ENST00000517138 NHSQ6T4R5 1651 aa0.34□□□□□ -2.35
SCARNA1-201ENST00000517138 NDUFS8O00217 210 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 LGALS1P09382 135 aaKnown RBP0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 CA5AP35218 305 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 TPI1P60174 286 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 RAB8AP61006 207 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 WRNQ14191 1432 aaPredicted RBP eCLIP0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 FMN1Q68DA7 1419 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 PPIP5K1Q6PFW1 1433 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 FANCMQ8IYD8 2048 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 FAM19A2Q8N3H0 131 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 LFNGQ8NES3 379 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 RNASEH2CQ8TDP1 164 aaKnown RBP0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 TRPM7Q96QT4 1865 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 LYSTQ99698 3801 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 PLCE1Q9P212 2302 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 LAMC1P11047 1609 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 HECW1Q76N89 1606 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 PHRF1Q9P1Y6 1649 aaKnown RBP0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 NUP153P49790 1475 aaKnown RBP0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 MAGI2Q86UL8 1455 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 MAGI1Q96QZ7 1491 aaPredicted RBP0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 SCN10AQ9Y5Y9 1956 aa0.34□□□□□ -2.36
SCARNA1-201ENST00000517138 UGGT2Q9NYU1 1516 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 LY75O60449 1722 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 H3BT86 120 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 H7C2G1 150 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 NUP62P37198 522 aaPredicted RBP0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 RPL28P46779 137 aaKnown RBP0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 DLX6P56179 175 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 ELOBQ15370 118 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 MIAQ16674 131 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 RPS19BP1Q86WX3 136 aaKnown RBP0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 DYNAPQ8N1N2 210 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 DYNC2LI1Q8TCX1 351 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 CCDC12Q8WUD4 166 aaPredicted RBP0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 CPNE2Q96FN4 548 aaPredicted RBP0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 TMEM208Q9BTX3 173 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 TMEM222Q9H0R3 208 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 TIMM9Q9Y5J7 89 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 KIF14Q15058 1648 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 FANCAO15360 1455 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 IQGAP1P46940 1657 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 URB2Q14146 1524 aaKnown RBP0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 TIAM2Q8IVF5 1701 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 DOT1LQ8TEK3 1739 aa0.33□□□□□ -2.36
SCARNA1-201ENST00000517138 ABCC12Q96J65 1359 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 SAMD9Q5K651 1589 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 RIMS2Q9UQ26 1411 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 SPAG17Q6Q759 2223 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 TRAV7A0A075B6U4 112 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 ADAP1O75689 374 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 NPPAP01160 153 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 CRATP43155 626 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 ETV1P50549 477 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 TMA16Q96EY4 203 aaKnown RBP0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 EMC3Q9P0I2 261 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 DNAH10Q8IVF4 4471 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 KNDC1Q76NI1 1749 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 UBR1Q8IWV7 1749 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 KIAA1551Q9HCM1 1747 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 NISCHQ9Y2I1 1504 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 DNAH6Q9C0G6 4158 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 TIAM1Q13009 1591 aa0.32□□□□□ -2.36
SCARNA1-201ENST00000517138 SMG6Q86US8 1419 aaKnown RBP0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 ERBINQ96RT1 1412 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 TRAPPC8Q9Y2L5 1435 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 C5P01031 1676 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 RICTORQ6R327 1708 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 SYNGR1O43759 233 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 PPBPP02775 128 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 ATP5G1P05496 136 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 SRSF6Q13247 344 aaKnown RBP0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 OR4D1Q15615 310 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 Q8WTZ3 238 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 TLCD1Q96CP7 247 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 MYO7AQ13402 2215 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 DNAH3Q8TD57 4116 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 VPS13DQ5THJ4 4388 aa0.31□□□□□ -2.36
SCARNA1-201ENST00000517138 TNXBP22105 4242 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms