RNA–Protein interactions for RNA: ENST00000515266.1

MBD4-210, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-210ENST00000515266 MAP1LC3AQ9H492 121 aa0.08□□□□□ -2.4
MBD4-210ENST00000515266 C15orf41Q9Y2V0 281 aa0.08□□□□□ -2.4
MBD4-210ENST00000515266 FRAS1Q86XX4 4008 aa0.08□□□□□ -2.4
MBD4-210ENST00000515266 DMBT1Q9UGM3 2413 aaPredicted RBP0.07□□□□□ -2.4
MBD4-210ENST00000515266 GOLGA6L19H0YKK7 550 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 TYMSP04818 313 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 CRYGAP11844 174 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 RAB4BP61018 213 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 CNBPP62633 177 aaKnown RBP0.07□□□□□ -2.4
MBD4-210ENST00000515266 RSU1Q15404 277 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 DEFB128Q7Z7B8 93 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 DEFB125Q8N687 156 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 GPR32P1Q8NGA4 272 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 OR4D11Q8NGI4 311 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 OR2T4Q8NH00 348 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 PFN4Q8NHR9 129 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 DIRAS2Q96HU8 199 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 CHMP4BQ9H444 224 aaKnown RBP0.07□□□□□ -2.4
MBD4-210ENST00000515266 PLEKHJ1Q9NW61 149 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 LAMA4Q16363 1823 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 COL4A5P29400 1685 aa0.07□□□□□ -2.4
MBD4-210ENST00000515266 ADGRB2O60241 1585 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 TRBV20OR9-2A0A075B6H5 130 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 ERICH2A1L162 156 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 INE1O15225 51 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 SPI1P17947 270 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 UBE2G2P60604 165 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 BATFQ16520 125 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 GUK1Q16774 197 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 PHF13Q86YI8 300 aaPredicted RBP0.06□□□□□ -2.4
MBD4-210ENST00000515266 CNBD2Q96M20 576 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 C7orf50Q9BRJ6 194 aaKnown RBP0.06□□□□□ -2.4
MBD4-210ENST00000515266 DERL1Q9BUN8 251 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 IMP3Q9NV31 184 aaKnown RBP0.06□□□□□ -2.4
MBD4-210ENST00000515266 CKLFQ9UBR5 152 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 IGSF10Q6WRI0 2623 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 STRCQ7RTU9 1775 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 FAT4Q6V0I7 4981 aa0.06□□□□□ -2.4
MBD4-210ENST00000515266 A0A0J9YY10 115 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 A0A1B0GX78 115 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 EVPLLA8MZ36 301 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 SSNA1O43805 119 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 OCMP0CE72 109 aaPredicted RBP0.05□□□□□ -2.4
MBD4-210ENST00000515266 MIFP14174 115 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 RPL12P30050 165 aaKnown RBP0.05□□□□□ -2.4
MBD4-210ENST00000515266 SRSF6Q13247 344 aaKnown RBP0.05□□□□□ -2.4
MBD4-210ENST00000515266 AADACL3Q5VUY0 350 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 OOSP2Q86WS3 158 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 TMEM70Q9BUB7 260 aa0.05□□□□□ -2.4
MBD4-210ENST00000515266 DCCP43146 1447 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 ZNF462Q96JM2 2506 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 TRBV6-8A0A0A6YYG3 113 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 A0A1W2PPM0 123 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 CLDN25C9JDP6 229 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 INMT-MINDY4F8WBC2 141 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 PFDN6O15212 129 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 ACOX3O15254 700 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 CALUO43852 315 aaPredicted RBP0.04□□□□□ -2.4
MBD4-210ENST00000515266 KCNJ8Q15842 424 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 C1orf195Q5TG92 126 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 CMTM5Q96DZ9 223 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 ACER3Q9NUN7 267 aa0.04□□□□□ -2.4
MBD4-210ENST00000515266 ANKHD1Q8IWZ3 2542 aaKnown RBP0.04□□□□□ -2.4
MBD4-210ENST00000515266 GREB1Q4ZG55 1949 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 TRAV1-1A0A0B4J248 108 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 GOLGA8KD6RF30 607 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 KRTAP2-3P0C7H8 128 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 C8orf88P0DMB2 117 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 ZNF25P17030 456 aaPredicted RBP0.03□□□□□ -2.4
MBD4-210ENST00000515266 MARCKSL1P49006 195 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 SPANXN5Q5MJ07 72 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 PDPK2PQ6A1A2 396 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 SCGB3A1Q96QR1 104 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 KRTAP2-4Q9BYR9 128 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 KRTAP2-1Q9BYU5 128 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 FAM96AQ9H5X1 160 aa0.03□□□□□ -2.4
MBD4-210ENST00000515266 SYNE1Q8NF91 8797 aaKnown RBP0.03□□□□□ -2.4
MBD4-210ENST00000515266 TNRC6BQ9UPQ9 1833 aaKnown RBP0.03□□□□□ -2.4
MBD4-210ENST00000515266 ZFYVE26Q68DK2 2539 aa0.03□□□□□ -2.41
MBD4-210ENST00000515266 MED12Q93074 2177 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 MEGF8Q7Z7M0 2845 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 PTPRZ1P23471 2315 aaPredicted RBP0.02□□□□□ -2.41
MBD4-210ENST00000515266 NCR3O14931 201 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 IGKV1-5P01602 117 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 SSR2P43308 183 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 IFITM2Q01629 132 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 MLLT11Q13015 90 aaPredicted RBP0.02□□□□□ -2.41
MBD4-210ENST00000515266 GRK1Q15835 563 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 PLEKHG7Q6ZR37 379 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 BPIFA4PQ86YQ2 179 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 WDR61Q9GZS3 305 aaKnown RBP0.02□□□□□ -2.41
MBD4-210ENST00000515266 TP73-AS1Q9UF72 201 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 C3orf18Q9UK00 162 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 RP1P56715 2156 aa0.02□□□□□ -2.41
MBD4-210ENST00000515266 BDP1A6H8Y1 2624 aa0.01□□□□□ -2.41
MBD4-210ENST00000515266 EXPH5Q8NEV8 1989 aa0.01□□□□□ -2.41
MBD4-210ENST00000515266 A0A0D9SG52 128 aa0.01□□□□□ -2.41
MBD4-210ENST00000515266 UBL3O95164 117 aa0.01□□□□□ -2.41
MBD4-210ENST00000515266 RHOGP84095 191 aa0.01□□□□□ -2.41
MBD4-210ENST00000515266 COQ5Q5HYK3 327 aa0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms