RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 IGKV1-39P01597 117 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 IGKV1D-39P04432 117 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 ADMP35318 185 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 VBP1P61758 197 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 Q56UQ5 140 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 TBC1D26Q86UD7 250 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 OR2C3Q8N628 320 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 ZNF414Q96IQ9 312 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 SPAG8Q99932 426 aaPredicted RBP9.91□□□□□ -0.82
PFDN1-206ENST00000514611 TMEM14BQ9NUH8 114 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 PRNDQ9UKY0 176 aa9.91□□□□□ -0.82
PFDN1-206ENST00000514611 NDUFA4O00483 81 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 TSPAN4O14817 238 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 JTBO76095 146 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 TSPAN5P62079 268 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 ODF3L2Q3SX64 289 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 RNASE12Q5GAN4 147 aaKnown RBP9.9□□□□□ -0.82
PFDN1-206ENST00000514611 SPSB3Q6PJ21 355 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 CADM3Q8N126 398 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 OR5B3Q8NH48 314 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 IL17DQ8TAD2 202 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 FUNDC2Q9BWH2 189 aa9.9□□□□□ -0.82
PFDN1-206ENST00000514611 HPGDSO60760 199 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 APOA1P02647 267 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 ELK1P19419 428 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 RCVRNP35243 200 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 MRGPRFQ96AM1 343 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 SEC22AQ96IW7 307 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 TMEM56Q96MV1 263 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 TSC22D3Q99576 134 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 SCPEP1Q9HB40 452 aa9.89□□□□□ -0.83
PFDN1-206ENST00000514611 M0QYG6 137 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 IGHV3-48P01763 117 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 EWSR1Q01844 656 aaKnown RBP eCLIP9.88□□□□□ -0.83
PFDN1-206ENST00000514611 IZUMO4Q1ZYL8 232 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 DEFB135Q30KP9 77 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 SLC38A6Q8IZM9 456 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 OR1P1Q8NH06 330 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 MISP3Q96FF7 219 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 ATP6V0BQ99437 205 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 FKBP11Q9NYL4 201 aa9.88□□□□□ -0.83
PFDN1-206ENST00000514611 IGHV3-49A0A0A0MS15 119 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 A0A0J9YWU9 116 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 SMIM31A0A1B0GVY4 71 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 C15orf62A8K5M9 175 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 I3L2K1 104 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 CTSDP07339 412 aaPredicted RBP9.87□□□□□ -0.83
PFDN1-206ENST00000514611 CTSGP08311 255 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 S100GP29377 79 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 PRCDQ00LT1 54 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 PMS2P11Q13670 270 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 SPINK9Q5DT21 86 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 LAMTOR1Q6IAA8 161 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 LPCAT3Q6P1A2 487 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 H2BFWTQ7Z2G1 175 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 OR4A16Q8NH70 328 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 CMTM3Q96MX0 182 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 RNF2Q99496 336 aa9.87□□□□□ -0.83
PFDN1-206ENST00000514611 FAM212BQ9NTI7 297 aaPredicted RBP9.87□□□□□ -0.83
PFDN1-206ENST00000514611 K7EMT4 169 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 NUPL2O15504 423 aaKnown RBP9.86□□□□□ -0.83
PFDN1-206ENST00000514611 MT-CO2P00403 227 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 RPL35AP18077 110 aaKnown RBP9.86□□□□□ -0.83
PFDN1-206ENST00000514611 PI3P19957 117 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 APOC4P55056 127 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 UCP3P55916 312 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 ZNF124Q15973 351 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 ZNF114Q8NC26 417 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 PINX1Q96BK5 328 aaKnown RBP9.86□□□□□ -0.83
PFDN1-206ENST00000514611 NAA50Q9GZZ1 169 aaKnown RBP9.86□□□□□ -0.83
PFDN1-206ENST00000514611 KLK11Q9UBX7 282 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 KMT2AQ03164 3969 aa9.86□□□□□ -0.83
PFDN1-206ENST00000514611 IGKV3-7A0A075B6H7 116 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 IGHV3OR16-13A0A075B7E8 117 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 IGHV3-74A0A0B4J1X5 117 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 IGHV7-4-1A0A0J9YVY3 117 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 OR4C46A6NHA9 309 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 FAM25AB3EWG3 89 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 FAM25CB3EWG5 89 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 FAM25GB3EWG6 89 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 CHEK1O14757 476 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 SPRY2O43597 315 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 YIF1AO95070 293 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 IGKV1-5P01602 117 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 TFPI2P48307 235 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 RELQ04864 619 aaPredicted RBP9.85□□□□□ -0.83
PFDN1-206ENST00000514611 Q6ZWC4 215 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 LYG2Q86SG7 212 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 LHFPL1Q86WI0 220 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 APRG1Q8IVJ8 170 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 OR10C1Q96KK4 312 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 RHPN1-AS1Q9BWJ2 59 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 SMPXQ9UHP9 88 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 TP53TG1Q9Y2A0 90 aa9.85□□□□□ -0.83
PFDN1-206ENST00000514611 CXorf65A6NEN9 183 aa9.84□□□□□ -0.83
PFDN1-206ENST00000514611 CD3DP04234 171 aa9.84□□□□□ -0.83
PFDN1-206ENST00000514611 SMIM18P0DKX4 95 aa9.84□□□□□ -0.83
PFDN1-206ENST00000514611 PGAM2P15259 253 aa9.84□□□□□ -0.83
PFDN1-206ENST00000514611 FCGR2BP31994 310 aaPredicted RBP9.84□□□□□ -0.83
PFDN1-206ENST00000514611 BMI1P35226 326 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms