RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 FAM219AQ8IW50 185 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 CENPSQ8N2Z9 138 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 IL22RA2Q969J5 263 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 CCDC32Q9BV29 185 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 KLK9Q9UKQ9 250 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 FLVCR2Q9UPI3 526 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 DMRT1Q9Y5R6 373 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 S4R3C0 116 aa10.74□□□□□ -0.69
USP46-209ENST00000514536 IFNA17P01571 189 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 IGHV3-23P01764 117 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 VAMP1P23763 118 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 HOXD3P31249 432 aaPredicted RBP10.73□□□□□ -0.69
USP46-209ENST00000514536 BTCP35070 178 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 LGI3Q8N145 548 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 SLC35G3Q8N808 338 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.73□□□□□ -0.69
USP46-209ENST00000514536 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.73□□□□□ -0.69
USP46-209ENST00000514536 OVOL1O14753 267 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 LYRM1O43325 122 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 ZP3P21754 424 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 PPP1R1AQ13522 171 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 PDLIM3Q53GG5 364 aaPredicted RBP10.73□□□□□ -0.69
USP46-209ENST00000514536 KPRPQ5T749 579 aaPredicted RBP10.73□□□□□ -0.69
USP46-209ENST00000514536 LYZL2Q7Z4W2 148 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 OR2C3Q8N628 320 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 PDCD10Q9BUL8 212 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 PLEKHA3Q9HB20 300 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 CACNG5Q9UF02 275 aa10.73□□□□□ -0.69
USP46-209ENST00000514536 F11RQ9Y624 299 aaKnown RBP10.73□□□□□ -0.69
USP46-209ENST00000514536 SEC14L6B5MCN3 397 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 CYB5BO43169 146 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 SFT2D2O95562 160 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 MFAP2P55001 183 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 SRPXP78539 464 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 ERHP84090 104 aaKnown RBP10.72□□□□□ -0.69
USP46-209ENST00000514536 ZNF846Q147U1 533 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 ANKRD55Q3KP44 614 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 EEF1AKMT3Q96AZ1 226 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 GPR61Q9BZJ8 451 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 WDR12Q9GZL7 423 aaKnown RBP10.72□□□□□ -0.69
USP46-209ENST00000514536 THYN1Q9P016 225 aa10.72□□□□□ -0.69
USP46-209ENST00000514536 A0A0B4J2A0 478 aa10.71□□□□□ -0.69
USP46-209ENST00000514536 MFSD2BA6NFX1 497 aa10.71□□□□□ -0.69
USP46-209ENST00000514536 PRB2P02812 416 aaPredicted RBP10.71□□□□□ -0.69
USP46-209ENST00000514536 KLF5Q13887 457 aaPredicted RBP10.71□□□□□ -0.69
USP46-209ENST00000514536 CLEC19AQ6UXS0 136 aa10.71□□□□□ -0.69
USP46-209ENST00000514536 SHPKQ9UHJ6 478 aa10.71□□□□□ -0.69
USP46-209ENST00000514536 IGHV3-21A0A0B4J1V1 117 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 PPP5D1E7EU14 171 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 BMPR1BO00238 502 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 SULT1A3P0DMM9 295 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 SULT1A4P0DMN0 295 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 SPCS3P61009 180 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 UBE2MP61081 183 aaKnown RBP10.7□□□□□ -0.7
USP46-209ENST00000514536 RPEL1Q2QD12 228 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 C9orf66Q5T8R8 295 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 OR1L6Q8NGR2 347 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 OR1P1Q8NH06 330 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 CXorf58Q96LI9 332 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 CCDC140Q96MF4 163 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 ENY2Q9NPA8 101 aa10.7□□□□□ -0.7
USP46-209ENST00000514536 NOTCH1P46531 2555 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 TRBV7-1A0A0A6YYK4 115 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 NXPH3O95157 252 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 CLEC3BP05452 202 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 ANXA7P20073 488 aaKnown RBP10.69□□□□□ -0.7
USP46-209ENST00000514536 SNCAP37840 140 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 HOXA1P49639 335 aaPredicted RBP10.69□□□□□ -0.7
USP46-209ENST00000514536 SYNJ2BPP57105 145 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 AARDQ4LEZ3 155 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 NMSQ5H8A3 153 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 FAM209BQ5JX69 171 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 OR52E5Q8NH55 327 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 PIGBOS1A0A0B4J2F0 54 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 C9orf170A2RU37 121 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 INS-IGF2F8WCM5 200 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 UPK1BO75841 260 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 OR2C1O95371 312 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 HLA-AP01891 365 aaKnown RBP10.69□□□□□ -0.7
USP46-209ENST00000514536 TCRBP04435 133 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 OR4E1P0C645 316 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 ARL3P36405 182 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 KRTAP10-11P60412 298 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 TATDN3Q17R31 274 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 ACSM6Q6P461 480 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 LRTM2Q8N967 370 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 ZNF502Q8TBZ5 544 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 VN1R17PQ8TDU5 208 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 MISP3Q96FF7 219 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 TBC1D24Q9ULP9 559 aa10.69□□□□□ -0.7
USP46-209ENST00000514536 TGP01266 2768 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 DUXBA0A1W2PPF3 345 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 K7EIM0 57 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 GGCTO75223 188 aaKnown RBP10.68□□□□□ -0.7
USP46-209ENST00000514536 SAP30O75446 220 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 IFITM3Q01628 133 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 SMCO1Q147U7 214 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 C4orf46Q504U0 113 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 MZT2BQ6NZ67 158 aa10.68□□□□□ -0.7
USP46-209ENST00000514536 LYG2Q86SG7 212 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms