RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 RPL23AP62750 156 aaKnown RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 VAMP2P63027 116 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 TAGLNQ01995 201 aaKnown RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 ZNF266Q14584 549 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 TOR2AQ5JU69 321 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 CENPVQ7Z7K6 275 aaPredicted RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 PUSL1Q8N0Z8 303 aaKnown RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 KLHDC1Q8N7A1 406 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 C5orf56Q8N8D9 126 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 Q8N9W7 124 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 OR52E5Q8NH55 327 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 PCNPQ8WW12 178 aaKnown RBP6.59□□□□□ -1.35
CCL28-204ENST00000514421 TCTEX1D2Q8WW35 142 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 TMED6Q8WW62 240 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 RITA1Q96K30 269 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 RASL11BQ9BPW5 248 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 WNT10AQ9GZT5 417 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 PRELID3BQ9Y3B1 194 aa6.59□□□□□ -1.35
CCL28-204ENST00000514421 FAM24AA6NFZ4 105 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 MARCH11A6NNE9 402 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 H0YJW9 148 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 H7C2Y5 167 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 KRASP01116 189 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 IGHG2P01859 326 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 OR8U8P0C7N1 319 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 ZP3P21754 424 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 UBE2KP61086 200 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 IZUMO4Q1ZYL8 232 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 BTNL8Q6UX41 500 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 TMEM14EPQ6UXP3 125 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 IL34Q6ZMJ4 242 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 ZNF429Q86V71 674 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 ZNF383Q8NA42 475 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 NPBQ8NG41 125 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 MARC2Q969Z3 335 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 MAGT1Q9H0U3 335 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 ZC4H2Q9NQZ6 224 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 PARP11Q9NR21 331 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 WASHC3Q9Y3C0 194 aa6.58□□□□□ -1.36
CCL28-204ENST00000514421 UMAD1C9J7I0 102 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 WRBO00258 174 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 DFFBO76075 338 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 APOA2P02652 100 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 NQO2P16083 231 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 G6PCP35575 357 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 CAV2P51636 162 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 LINC00205P59089 165 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 RPS16P62249 146 aaKnown RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 MMDQ15546 238 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 H2BFWTQ7Z2G1 175 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 SLC35E3Q7Z769 313 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 STX12Q86Y82 276 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 OR5AU1Q8NGC0 362 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 OR1S2Q8NGQ3 325 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 OR5C1Q8NGR4 320 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 OR4S2Q8NH73 311 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 RNASE11Q8TAA1 199 aaKnown RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 WIPF2Q8TF74 440 aaPredicted RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 FLYWCH2Q96CP2 140 aaKnown RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 R3HDM4Q96D70 268 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 RBMXL1Q96E39 390 aaKnown RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 GNPNAT1Q96EK6 184 aaPredicted RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 CIB3Q96Q77 187 aaPredicted RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 ATP5SQ99766 215 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 RBKSQ9H477 322 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 KIAA1456Q9P272 454 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 STRAPQ9Y3F4 350 aaKnown RBP6.57□□□□□ -1.36
CCL28-204ENST00000514421 MGAM2Q2M2H8 2515 aa6.57□□□□□ -1.36
CCL28-204ENST00000514421 TET2Q6N021 2002 aaPredicted RBP6.56□□□□□ -1.36
CCL28-204ENST00000514421 LINC01548A6NM66 108 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 PMS2P5A8MQ11 134 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 ZNF705EA8MWA4 302 aaPredicted RBP6.56□□□□□ -1.36
CCL28-204ENST00000514421 TEX46H3BTG2 121 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 I3L521 148 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 M0QZ24 198 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 NBR2O15453 112 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 NDUFA3O95167 84 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 LGALS7P47929 136 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 HBG1P69891 147 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 HBG2P69892 147 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 C5orf64Q2M2E5 130 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 VWC2Q2TAL6 325 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 TMEM95Q3KNT9 176 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 C10orf91Q5T1B1 145 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 DPPA3Q6W0C5 159 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 HAPLN4Q86UW8 402 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 PDPNQ86YL7 162 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 COMMD1Q8N668 190 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 AIFM2Q9BRQ8 373 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 SMIM3Q9BZL3 60 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 SLC35D1Q9NTN3 355 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 TMEM14BQ9NUH8 114 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 PSENENQ9NZ42 101 aa6.56□□□□□ -1.36
CCL28-204ENST00000514421 FOXA2Q9Y261 457 aaPredicted RBP6.56□□□□□ -1.36
CCL28-204ENST00000514421 NOTCH3Q9UM47 2321 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 A0A1B0GW64 132 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 AP4M1O00189 453 aa6.55□□□□□ -1.36
CCL28-204ENST00000514421 RRHO14718 337 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms