RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 GNG7O60262 68 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 TSPOP30536 169 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 HIST1H1AQ02539 215 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-211ENST00000513346 ASCL5Q7RTU5 278 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 HARBI1Q96MB7 349 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 ZNF785A8K8V0 405 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 HYPMO75409 117 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 RNF144BQ7Z419 303 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 C5orf30Q96GV9 206 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 MRPL32Q9BYC8 188 aaKnown RBP9.47□□□□□ -0.89
TCOF1-211ENST00000513346 RNASE7Q9H1E1 156 aaKnown RBP9.47□□□□□ -0.89
TCOF1-211ENST00000513346 IGF2RP11717 2491 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 SYNGR3O43761 229 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 ZIC3O60481 467 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 TNXAQ16473 311 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 TMEM238LA0A1B0GVL6 79 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 A6NJY4 79 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 GPX1P07203 203 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 C3orf79P0CE67 100 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 GPR6P46095 362 aaPredicted RBP9.47□□□□□ -0.89
TCOF1-211ENST00000513346 SHISA5Q8N114 240 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 OR2K2Q8NGT1 345 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 DPF1Q92782 380 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 SIGMAR1Q99720 223 aa9.47□□□□□ -0.89
TCOF1-211ENST00000513346 TMSB15BA0A087X1C1 80 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 S100A4P26447 101 aaKnown RBP9.46□□□□□ -0.89
TCOF1-211ENST00000513346 PRDX2P32119 198 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 MRPS16Q9Y3D3 137 aaKnown RBP9.46□□□□□ -0.89
TCOF1-211ENST00000513346 INSIG2Q9Y5U4 225 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 PTPRDP23468 1912 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 SEC11AP67812 179 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 OR5A1Q8NGJ0 315 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 SRXN1Q9BYN0 137 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 C1RLQ9NZP8 487 aa9.46□□□□□ -0.89
TCOF1-211ENST00000513346 LOC107984156A0A0G2JMH3 177 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 F2RL2O00254 374 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 KLF7O75840 302 aaPredicted RBP9.46□□□□□ -0.9
TCOF1-211ENST00000513346 CKS2P33552 79 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 ARL17AQ8IVW1 177 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 SNRNP40Q96DI7 357 aaKnown RBP9.46□□□□□ -0.9
TCOF1-211ENST00000513346 OTOGLQ3ZCN5 2332 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 SSTR5P35346 364 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 HIST1H4GQ99525 98 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 NCOR1P1Q9H4R4 102 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 ANAPC10Q9UM13 185 aa9.46□□□□□ -0.9
TCOF1-211ENST00000513346 C17orf98A8MV24 154 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 PLAUP00749 431 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 RPL7P18124 248 aaKnown RBP9.45□□□□□ -0.9
TCOF1-211ENST00000513346 TPTE2P1Q5T6R2 138 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF703Q9H7S9 590 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-211ENST00000513346 SLC25A10Q9UBX3 287 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-211ENST00000513346 SOX21Q9Y651 276 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-211ENST00000513346 ESPL1Q14674 2120 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 MGST3O14880 152 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 GOSR1O95249 250 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 RFPL3SP0C7P2 107 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 TDGF1P13385 188 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 IL15RAQ13261 267 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 PLPPR1Q8TBJ4 325 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 WDR83OSQ9Y284 106 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF257Q9Y2Q1 563 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 ORM1P02763 201 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 HERVK_113P61574 105 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 PCSK4Q6UW60 755 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 FAM131CQ96AQ9 280 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF414Q96IQ9 312 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 SGK494Q96LW2 274 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 CHCHD2Q9Y6H1 151 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-211ENST00000513346 MED13LQ71F56 2210 aa9.45□□□□□ -0.9
TCOF1-211ENST00000513346 TYMSP04818 313 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 UNQ6494/PRO21346Q6UXR6 183 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 WDR31Q8NA23 367 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 SRSF12Q8WXF0 261 aaKnown RBP9.44□□□□□ -0.9
TCOF1-211ENST00000513346 OR5P3Q8WZ94 311 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 SIGLEC12Q96PQ1 595 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 CD59P13987 128 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 BMI1P35226 326 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 KIR2DL2P43627 348 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-211ENST00000513346 MPV17L2Q567V2 206 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 ITLN1Q8WWA0 313 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 HIGD1AQ9Y241 93 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 TMEM189A5PLL7 270 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 SLC25A17O43808 307 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 PSG1P11464 419 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 ATP5IP56385 69 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-211ENST00000513346 ZNF841Q6ZN19 808 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 CCL13Q99616 98 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 TNFRSF19Q9NS68 423 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 SPTBN4Q9H254 2564 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 SNRNP200O75643 2136 aaKnown RBP9.44□□□□□ -0.9
TCOF1-211ENST00000513346 DOCK9Q9BZ29 2069 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 PLXNA3P51805 1871 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 OCIAD2Q56VL3 154 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 LCN12Q6JVE5 192 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 MYO7BQ6PIF6 2116 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 VKORC1L1Q8N0U8 176 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 RASL11BQ9BPW5 248 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 UFC1Q9Y3C8 167 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 HILPDAQ9Y5L2 63 aa9.44□□□□□ -0.9
TCOF1-211ENST00000513346 IGKV1-12A0A0C4DH73 117 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms