RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 RIBC2Q9H4K1 309 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 RAB9BQ9NP90 201 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 KCNK7Q9Y2U2 307 aa3.37□□□□□ -1.87
HTT-211ENST00000513326 RPL36Q9Y3U8 105 aaKnown RBP3.37□□□□□ -1.87
HTT-211ENST00000513326 IGHV3OR16-13A0A075B7E8 117 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 A0A0A6YYD4 124 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 IGHV3-74A0A0B4J1X5 117 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 OR4C46A6NHA9 309 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 TMEM212A6NML5 194 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 C15orf61A6NNL5 157 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 ZNF705EA8MWA4 302 aaPredicted RBP3.36□□□□□ -1.87
HTT-211ENST00000513326 FCGR3BO75015 233 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 PDCD6O75340 191 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 FKBP6O75344 327 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 GPX5O75715 221 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 CRTAPO75718 401 aaPredicted RBP3.36□□□□□ -1.87
HTT-211ENST00000513326 DFFBO76075 338 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 NAPSAO96009 420 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 APOHP02749 345 aaPredicted RBP3.36□□□□□ -1.87
HTT-211ENST00000513326 IGFBP3P17936 291 aaPredicted RBP3.36□□□□□ -1.87
HTT-211ENST00000513326 FUT3P21217 361 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 CEACAM6P40199 344 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 LINC01547P58512 204 aaPredicted RBP3.36□□□□□ -1.87
HTT-211ENST00000513326 UBE2KP61086 200 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 KIAA1644Q3SXP7 199 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 FAM106AQ4KMX7 169 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 C6orf223Q8N319 242 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 ZNF502Q8TBZ5 544 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 GIMAP1Q8WWP7 306 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 MARC2Q969Z3 335 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 PTX4Q96A99 478 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 LGALS12Q96DT0 336 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 NEDD4LQ96PU5 975 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 RNF2Q99496 336 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 CIB1Q99828 191 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 NICN1Q9BSH3 213 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 ZNF436Q9C0F3 470 aaPredicted RBP3.36□□□□□ -1.87
HTT-211ENST00000513326 SPACA1Q9HBV2 294 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 TMEM138Q9NPI0 162 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 SDHAF2Q9NX18 166 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 MRPL27Q9P0M9 148 aaKnown RBP3.36□□□□□ -1.87
HTT-211ENST00000513326 ZNF257Q9Y2Q1 563 aa3.36□□□□□ -1.87
HTT-211ENST00000513326 IGLV11-55A0A075B6I3 123 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 IGHV3-21A0A0B4J1V1 117 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 NBDYA0A0U1RRE5 68 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 IFITM10A6NMD0 228 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 KNCNA6PVL3 124 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 PMS2P5A8MQ11 134 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 ITGB1BP1O14713 200 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 PRAF2O60831 178 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 CA11O75493 328 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 CRYZL1O95825 349 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 LALBAP00709 142 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 RLN1P04808 185 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 GALP22466 123 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 HTR2CP28335 458 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 DEFB131AP59861 70 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 PPP3R1P63098 170 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 HLA-DRB3P79483 266 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 LBHQ53QV2 105 aaPredicted RBP3.35□□□□□ -1.87
HTT-211ENST00000513326 OR2B11Q5JQS5 317 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 OR2G6Q5TZ20 316 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 KDM4DQ6B0I6 523 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 JAGN1Q8N5M9 183 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 NHLRC2Q8NBF2 726 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 CSNK1G2-AS1Q8NCQ2 148 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 OR8J1Q8NGP2 316 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 EEF1AKMT3Q96AZ1 226 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 CPNE2Q96FN4 548 aaPredicted RBP3.35□□□□□ -1.87
HTT-211ENST00000513326 S100A13Q99584 98 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 C20orf24Q9BUV8 137 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 YTHDF1Q9BYJ9 559 aaKnown RBP3.35□□□□□ -1.87
HTT-211ENST00000513326 PRRG3Q9BZD7 231 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 FAM107BQ9H098 131 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 OR2D2Q9H210 308 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 RDH8Q9NYR8 311 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 ABRACLQ9P1F3 81 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 ZNF221Q9UK13 617 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 UFC1Q9Y3C8 167 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 GMPPBQ9Y5P6 360 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 ETV7Q9Y603 341 aa3.35□□□□□ -1.87
HTT-211ENST00000513326 IGHV3-66A0A0C4DH42 116 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 TRBV5-5A0A0J9YX44 114 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 OR2T8A6NH00 312 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 DYNC1I1O14576 645 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 CHEK1O14757 476 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 TGOLN2O43493 480 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 ZNF780AO75290 641 aaPredicted RBP3.34□□□□□ -1.87
HTT-211ENST00000513326 IFNA21P01568 189 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 IFNA17P01571 189 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 CRYGCP07315 174 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 ZNF735P0CB33 412 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 MIFP14174 115 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 HTN3P15516 51 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 HOXB6P17509 224 aaKnown RBP3.34□□□□□ -1.87
HTT-211ENST00000513326 PSMB6P28072 239 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 EMP1P54849 157 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 KRTAP10-1P60331 282 aa3.34□□□□□ -1.87
HTT-211ENST00000513326 RPS11P62280 158 aaKnown RBP eCLIP3.34□□□□□ -1.87
HTT-211ENST00000513326 VMA21Q3ZAQ7 101 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms