RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 DEFA5Q01523 94 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 ACOT6Q3I5F7 207 aaPredicted RBP10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 KHDC3LQ587J8 217 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 OR10G4Q8NGN3 311 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 IGFBPL1Q8WX77 278 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 RPEQ96AT9 228 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 NKX6-2Q9C056 277 aaPredicted RBP10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 SLC35B3Q9H1N7 401 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 TMEM231Q9H6L2 316 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 NPVFQ9HCQ7 196 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 INSIG2Q9Y5U4 225 aa10.58□□□□□ -0.72
DEPDC1B-206ENST00000512452 CTXND1A0A1B0GTU2 59 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 OOSP1A8MZH6 123 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 TSPAN9O75954 239 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 CA2P00918 260 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 IFNA1P01562 189 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 IGHV2-5P01817 119 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 HSPB1P04792 205 aaKnown RBP10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 CDKN1AP38936 164 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 OPRK1P41145 380 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 RAB31Q13636 194 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 TMEM249Q2WGJ8 235 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 KRTAP24-1Q3LI83 254 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 MMD2Q8IY49 270 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 Q8N7P7 452 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 CACNG8Q8WXS5 425 aa10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 ACTR3CQ9C0K3 210 aaPredicted RBP10.57□□□□□ -0.72
DEPDC1B-206ENST00000512452 ODF3BA8MYP8 253 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 CYB5BO43169 146 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 SCO1O75880 301 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 COX7A1P24310 79 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 HTR1DP28221 377 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 GPX4P36969 197 aaPredicted RBP10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 SUB1P53999 127 aaKnown RBP eCLIP10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 DIAPH2-AS1Q14236 149 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 FFAR4Q5NUL3 377 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 TPTE2P1Q5T6R2 138 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 TREML4Q6UXN2 200 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 PNKDQ8N490 385 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 CLDND2Q8NHS1 167 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 SUN5Q8TC36 379 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 SLC39A9Q9NUM3 307 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 DPM3Q9P2X0 92 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 LSM4Q9Y4Z0 139 aaKnown RBP10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 MEGF8Q7Z7M0 2845 aa10.56□□□□□ -0.72
DEPDC1B-206ENST00000512452 MAP1LC3B2A6NCE7 125 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 SEC14L6B5MCN3 397 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 C9JQL5 133 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 CRYGBP07316 175 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 PDLIM4P50479 330 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 PPT1P50897 306 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 ELLP55199 621 aaPredicted RBP10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 CCL20P78556 96 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 HABP2Q14520 560 aaPredicted RBP10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 ZNF726P1Q15940 193 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 MINOS1Q5TGZ0 78 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 ACSM6Q6P461 480 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 TEPPQ6URK8 271 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 RBMS3Q6XE24 437 aaKnown RBP10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 MOB3BQ86TA1 216 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 RPP25LQ8N5L8 163 aaKnown RBP10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 OR10G9Q8NGN4 311 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 OR10G7Q8NGN6 311 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 RNASEH2CQ8TDP1 164 aaKnown RBP10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 C19orf24Q9BVV8 132 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 HINT2Q9BX68 163 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 KRTAP17-1Q9BYP8 105 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 MAP1LC3BQ9GZQ8 125 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 MINOS1-NBL1R4GNA1 71 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 ANK2Q01484 3957 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 MALRD1Q5VYJ5 2156 aa10.55□□□□□ -0.72
DEPDC1B-206ENST00000512452 LOC102723971A0A1B0GUV8 181 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 A0A1W2PPI3 338 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 COMPP49747 757 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 ARF6P62330 175 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 ICAM4Q14773 271 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 PSG5Q15238 335 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 PRSS8Q16651 343 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 GUCA2BQ16661 112 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 CCDC144NLQ6NUI1 221 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 TMEM144Q7Z5S9 345 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 P2RX4Q99571 388 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 SRSF8Q9BRL6 282 aaKnown RBP10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 GGTLC1Q9BX51 225 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 VSIRQ9H7M9 311 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 ZNF430Q9H8G1 570 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 POLR3KQ9Y2Y1 108 aaPredicted RBP10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 DOCK11Q5JSL3 2073 aa10.54□□□□□ -0.72
DEPDC1B-206ENST00000512452 TET2Q6N021 2002 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 IGHV2-70DA0A0C4DH43 119 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 SMCO3A2RU48 225 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 NDUFS8O00217 210 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 SLC25A17O43808 307 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 FOXH1O75593 365 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 SRP19P09132 144 aaKnown RBP10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 BCL2P10415 239 aa10.53□□□□□ -0.72
DEPDC1B-206ENST00000512452 RPL29P47914 159 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms