RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 KBTBD11O94819 623 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 DHFRP00374 187 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 HLA-DQB1P01920 261 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 CLEC3BP05452 202 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 AREGP15514 252 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 HIST1H1BP16401 226 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 HIST1H1DP16402 221 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 CTRB1P17538 263 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 GADD45AP24522 165 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 PSMA1P25786 263 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 PSMB6P28072 239 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 MAS1LP35410 378 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 TALDO1P37837 337 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 RPL27AP46776 148 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 APOC4P55056 127 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 BRWD1-AS2P59051 145 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 RPS25P62851 125 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 RPL30P62888 115 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 RAB32Q13637 225 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 ARFRP1Q13795 201 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 IRF3Q14653 427 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 TRAM1Q15629 374 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 SSX1Q16384 188 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 DEFB135Q30KP9 77 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 ZNF585BQ52M93 769 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 OR2B11Q5JQS5 317 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 HES5Q5TA89 166 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 CTRB2Q6GPI1 263 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 BTNL8Q6UX41 500 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 UNQ9165/PRO28630Q6UXU0 137 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 KCTD9Q7L273 389 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 PUSL1Q8N0Z8 303 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 OR2C3Q8N628 320 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 OR1L6Q8NGR2 347 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 VSTM2AQ8TAG5 236 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 TMEM167AQ8TBQ9 72 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 MARC2Q969Z3 335 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 HSD17B10Q99714 261 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 C5orf66Q9H5L9 145 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 SCN3BQ9NY72 215 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 MRPL27Q9P0M9 148 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 MRPS7Q9Y2R9 242 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 RBMX2Q9Y388 322 aaKnown RBP4.38□□□□□ -1.71
CLCN3-207ENST00000511092 PRELID3BQ9Y3B1 194 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 OR2W1Q9Y3N9 320 aa4.38□□□□□ -1.71
CLCN3-207ENST00000511092 IGLV11-55A0A075B6I3 123 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 TRBV7-1A0A0A6YYK4 115 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 IGKV1D-13A0A0B4J2D9 117 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 KIR2DL5BA0A0G2JN68 375 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 KIR2DL5BA0A0G2JPC4 375 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 METTL21EPA6NDL7 271 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 MFSD2BA6NFX1 497 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 IFITM5A6NNB3 132 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 SLC22A5O76082 557 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 CTXN2P0C2S0 81 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 HSMCR30P0CW71 290 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 IGKV1-13P0DP09 117 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 DEFA4P12838 97 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 CD36P16671 472 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 GALP22466 123 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 NFYAP23511 347 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-207ENST00000511092 FABP5Q01469 135 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 MLLT11Q13015 90 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-207ENST00000511092 EIF4EBP1Q13541 118 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-207ENST00000511092 OGFRL1Q5TC84 451 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-207ENST00000511092 SLC38A6Q8IZM9 456 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 KIR2DL5AQ8N109 375 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 TMEM217Q8N7C4 229 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 OR4S2Q8NH73 311 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 KIR2DL5BQ8NHK3 375 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 CXorf58Q96LI9 332 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 SPAG8Q99932 426 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-207ENST00000511092 QTRT1Q9BXR0 403 aaKnown RBP4.37□□□□□ -1.71
CLCN3-207ENST00000511092 UBQLN2Q9UHD9 624 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 ELF5Q9UKW6 265 aaPredicted RBP4.37□□□□□ -1.71
CLCN3-207ENST00000511092 UFC1Q9Y3C8 167 aa4.37□□□□□ -1.71
CLCN3-207ENST00000511092 TRAV1-2A0A0B4J238 106 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 IGHV3-35A0A0C4DH35 117 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 TSPAN4O14817 238 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 HRASP01112 189 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 REG1AP05451 166 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 MYOD1P15172 320 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 HLA-GP17693 338 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 DTYMKP23919 212 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 CRHBPP24387 322 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 PTBP1P26599 531 aaKnown RBP eCLIP4.36□□□□□ -1.713e-10■■■■■ 55.5
CLCN3-207ENST00000511092 GPR183P32249 361 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 TCTAP57738 103 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 OR10A3P58181 314 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 OR2B8PP59922 312 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 KRTAP10-1P60331 282 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 RPL8P62917 257 aaKnown RBP4.36□□□□□ -1.71
CLCN3-207ENST00000511092 ARL6IP1Q15041 203 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 RCN1Q15293 331 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 HACD4Q5VWC8 232 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 PLET1Q6UQ28 207 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 SSX9Q7RTT3 188 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 SPARTQ8N0X7 666 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 ZNF502Q8TBZ5 544 aa4.36□□□□□ -1.71
CLCN3-207ENST00000511092 TCTEX1D2Q8WW35 142 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms