RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 TSC22D3Q99576 134 aa11.48□□□□□ -0.57
TPM3-219ENST00000509409 SPAG8Q99932 426 aaPredicted RBP11.48□□□□□ -0.57
TPM3-219ENST00000509409 CHRDL1Q9BU40 450 aa11.48□□□□□ -0.57
TPM3-219ENST00000509409 FXYD6Q9H0Q3 95 aa11.48□□□□□ -0.57
TPM3-219ENST00000509409 DAZ1Q9NQZ3 744 aaKnown RBP11.48□□□□□ -0.57
TPM3-219ENST00000509409 TSPAN4O14817 238 aa11.47□□□□□ -0.57
TPM3-219ENST00000509409 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
TPM3-219ENST00000509409 MFAP2P55001 183 aa11.47□□□□□ -0.57
TPM3-219ENST00000509409 APOC4P55056 127 aa11.47□□□□□ -0.57
TPM3-219ENST00000509409 SNX29P2Q8IUI4 249 aa11.47□□□□□ -0.57
TPM3-219ENST00000509409 CADM3Q8N126 398 aa11.47□□□□□ -0.57
TPM3-219ENST00000509409 OR5B3Q8NH48 314 aa11.47□□□□□ -0.57
TPM3-219ENST00000509409 OR4A16Q8NH70 328 aa11.47□□□□□ -0.57
TPM3-219ENST00000509409 YIF1AO95070 293 aa11.46□□□□□ -0.57
TPM3-219ENST00000509409 H2BFWTQ7Z2G1 175 aa11.46□□□□□ -0.57
TPM3-219ENST00000509409 TBC1D26Q86UD7 250 aa11.46□□□□□ -0.57
TPM3-219ENST00000509409 GPX8Q8TED1 209 aa11.46□□□□□ -0.57
TPM3-219ENST00000509409 SLC25A46Q96AG3 418 aa11.46□□□□□ -0.57
TPM3-219ENST00000509409 MISP3Q96FF7 219 aa11.46□□□□□ -0.57
TPM3-219ENST00000509409 ATP6V0BQ99437 205 aa11.46□□□□□ -0.57
TPM3-219ENST00000509409 K7EIM0 57 aa11.45□□□□□ -0.58
TPM3-219ENST00000509409 K7EMT4 169 aa11.45□□□□□ -0.58
TPM3-219ENST00000509409 NUPL2O15504 423 aaKnown RBP11.45□□□□□ -0.58
TPM3-219ENST00000509409 SPRY2O43597 315 aa11.45□□□□□ -0.58
TPM3-219ENST00000509409 TNFAIP8O95379 198 aa11.45□□□□□ -0.58
TPM3-219ENST00000509409 OR1P1Q8NH06 330 aa11.45□□□□□ -0.58
TPM3-219ENST00000509409 TMEM14BQ9NUH8 114 aa11.45□□□□□ -0.58
TPM3-219ENST00000509409 PLECQ15149 4684 aaKnown RBP11.45□□□□□ -0.58
TPM3-219ENST00000509409 CXorf65A6NEN9 183 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 DBX1A6NMT0 343 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 C15orf61A6NNL5 157 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 UBE2CO00762 179 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 APOA1P02647 267 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 CTSDP07339 412 aaPredicted RBP11.44□□□□□ -0.58
TPM3-219ENST00000509409 RPL35AP18077 110 aaKnown RBP11.44□□□□□ -0.58
TPM3-219ENST00000509409 RCVRNP35243 200 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 ADMP35318 185 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 MFAP4P55083 255 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 RELQ04864 619 aaPredicted RBP11.44□□□□□ -0.58
TPM3-219ENST00000509409 PMS2P11Q13670 270 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 STPG3Q8N7X2 389 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 SCPEP1Q9HB40 452 aa11.44□□□□□ -0.58
TPM3-219ENST00000509409 FAM212BQ9NTI7 297 aaPredicted RBP11.44□□□□□ -0.58
TPM3-219ENST00000509409 HYDINQ4G0P3 5121 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 A0A0J9YWU9 116 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 C15orf62A8K5M9 175 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 FAM25AB3EWG3 89 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 FAM25CB3EWG5 89 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 FAM25GB3EWG6 89 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 F8W735 103 aaPredicted RBP11.43□□□□□ -0.58
TPM3-219ENST00000509409 CTSGP08311 255 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 PGAM2P15259 253 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 BMI1P35226 326 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 VBP1P61758 197 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 NCS1P62166 190 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 ERHP84090 104 aaKnown RBP11.43□□□□□ -0.58
TPM3-219ENST00000509409 DEFB135Q30KP9 77 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 Q6ZWC4 215 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 SEC22AQ96IW7 307 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 CMTM3Q96MX0 182 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 SMPXQ9UHP9 88 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 TP53TG1Q9Y2A0 90 aa11.43□□□□□ -0.58
TPM3-219ENST00000509409 EPPK1P58107 5090 aaKnown RBP11.43□□□□□ -0.58
TPM3-219ENST00000509409 IGKV3-7A0A075B6H7 116 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 IGHV3-49A0A0A0MS15 119 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 HPGDSO60760 199 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 MT-CO2P00403 227 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 IGHV3-48P01763 117 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 ELK1P19419 428 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 TFPI2P48307 235 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 UCP3P55916 312 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 HSPE1P61604 102 aaKnown RBP11.42□□□□□ -0.58
TPM3-219ENST00000509409 RNASE12Q5GAN4 147 aaKnown RBP11.42□□□□□ -0.58
TPM3-219ENST00000509409 TMEM116Q8NCL8 245 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 MRGPRFQ96AM1 343 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
TPM3-219ENST00000509409 TXN2Q99757 166 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 FUNDC2Q9BWH2 189 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 RHPN1-AS1Q9BWJ2 59 aa11.42□□□□□ -0.58
TPM3-219ENST00000509409 C6orf62Q9GZU0 229 aaPredicted RBP11.42□□□□□ -0.58
TPM3-219ENST00000509409 KIR2DL5BA0A0G2JN68 375 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 KIR2DL5BA0A0G2JPC4 375 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 IGHV7-4-1A0A0J9YVY3 117 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 I3L2K1 104 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 M0QYG6 137 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 CHEK1O14757 476 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 IGKV1-39P01597 117 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 IGKV1D-39P04432 117 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 RORCP51449 518 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 CMC4P56277 68 aaPredicted RBP11.41□□□□□ -0.58
TPM3-219ENST00000509409 ODF3L2Q3SX64 289 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 MZT2AQ6P582 158 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 LYG2Q86SG7 212 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 WFDC3Q8IUB2 231 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 KIR2DL5AQ8N109 375 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 KIR2DL5BQ8NHK3 375 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 GALNT14Q96FL9 552 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 RNF2Q99496 336 aa11.41□□□□□ -0.58
TPM3-219ENST00000509409 BIRC6Q9NR09 4857 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms