RNA–Protein interactions for RNA: ENST00000509092.5

PDGFRA-207, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,417 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-207ENST00000509092 OTOL1A6NHN0 477 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 SIVA1O15304 175 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 G6PCP35575 357 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 INO80CQ6PI98 192 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 ATP5L2Q7Z4Y8 100 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 TEX45Q8NA69 505 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 NUP35Q8NFH5 326 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 OR4X2Q8NGF9 303 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 OR10D3Q8NH80 312 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 TMEM54Q969K7 222 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 IGF2BP2-AS1Q96M15 143 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 SPAG8Q99932 426 aaPredicted RBP8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 VGLL1Q99990 258 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 C19orf24Q9BVV8 132 aa8.29□□□□□ -1.08
PDGFRA-207ENST00000509092 A0A1W2PNR3 127 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 F8W1H4 67 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 SPATA31B1PQ5VZV4 182 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 TREML4Q6UXN2 200 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 DRAM1Q8N682 238 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 NHLRC2Q8NBF2 726 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 IL1F10Q8WWZ1 152 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 FAM168AQ92567 244 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 GPR82Q96P67 336 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 MCRIP2Q9BUT9 160 aaKnown RBP8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 ERG28Q9UKR5 140 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 R4GN57 208 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 UNC80Q8N2C7 3258 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 A1L4Q6 167 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 SYNGR3O43761 229 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 FOXH1O75593 365 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 WISP2O76076 250 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 IGHV3-7P01780 117 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 EFNB3Q15768 340 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 BOD1L2Q8IYS8 172 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 OR52E5Q8NH55 327 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 HS3ST6Q96QI5 342 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 SSBP3Q9BWW4 388 aaPredicted RBP8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 IGFLR1Q9H665 355 aa8.28□□□□□ -1.08
PDGFRA-207ENST00000509092 A0A1B0GXF2 115 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 H0Y8G0 127 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 DHHO43323 396 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 ZIC3O60481 467 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 NEURL1O76050 574 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 FAM87AP0C7U9 286 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 SMIM13P0DJ93 91 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 FCGR2BP31994 310 aaPredicted RBP8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 NRN1LQ496H8 165 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 FAM231DQ6ZW35 169 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 MOB1BQ7L9L4 216 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 ADTRPQ96IZ2 230 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 TMEM167BQ9NRX6 74 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 LOC102723996A0A087X1L8 192 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 KLF7O75840 302 aaPredicted RBP8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 GATA3P23771 443 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 ARL4DP49703 201 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 GUSBP1Q15486 140 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 TEPPQ6URK8 271 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 ABHD17AQ96GS6 310 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 SH2D2AQ9NP31 389 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 SLC25A10Q9UBX3 287 aaPredicted RBP8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 LOXL2Q9Y4K0 774 aa8.27□□□□□ -1.09
PDGFRA-207ENST00000509092 TRBV7-9A0A0J9YWB2 115 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 KBTBD11-OT1A0A1B0GTJ5 212 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 FBLL1A6NHQ2 334 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 VSTM5A8MXK1 200 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 H0Y8X5 98 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 SMAD7O15105 426 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 FASLGP48023 281 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 CAMPP49913 170 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 HERV-K104P63124 156 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 SSBP2P81877 361 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 SPINK9Q5DT21 86 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 C8orf86Q6ZUL3 223 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 LINC00596Q86U02 117 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 TTC9CQ8N5M4 171 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 NANOS1Q8WY41 292 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 GALMQ96C23 342 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 RNF183Q96D59 192 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 COL25A1Q9BXS0 654 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 IDI2-AS1Q9NZ38 188 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 DUSP13Q9UII6 198 aa8.26□□□□□ -1.09
PDGFRA-207ENST00000509092 A0A1B0GX78 115 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 C19orf67A6NJJ6 358 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 NPIPA3F8WFD2 350 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 LINC01565O15544 149 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 ZNF816Q0VGE8 651 aaPredicted RBP8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 WFDC2Q14508 124 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 KRTAP27-1Q3LI81 207 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 TMEM164Q5U3C3 297 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 FAM27BQ5VT28 67 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 SLC37A2Q8TED4 501 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 CYSLTR1Q9Y271 337 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 TNRC6BQ9UPQ9 1833 aaKnown RBP8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 NTF4P34130 210 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 TMPRSS3P57727 454 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 H2BFWTQ7Z2G1 175 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 OR1L3Q8NH93 324 aa8.25□□□□□ -1.09
PDGFRA-207ENST00000509092 SSMEM1Q8WWF3 244 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms