RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 FUNDC2Q9BWH2 189 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 GGTLC1Q9BX51 225 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 SCPEP1Q9HB40 452 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 TMEM14BQ9NUH8 114 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 C21orf62Q9NYP8 219 aa9.32□□□□□ -0.92
PDPN-208ENST00000509009 K7EMT4 169 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 NDUFA4O00483 81 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 TSPAN4O14817 238 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 CTSGP08311 255 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 UCP3P55916 312 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 VBP1P61758 197 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 TBC1D26Q86UD7 250 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 SNX29P2Q8IUI4 249 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 SLC38A6Q8IZM9 456 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 SEC22AQ96IW7 307 aa9.31□□□□□ -0.92
PDPN-208ENST00000509009 DAZ1Q9NQZ3 744 aaKnown RBP9.31□□□□□ -0.92
PDPN-208ENST00000509009 C15orf61A6NNL5 157 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 HPGDSO60760 199 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 IGKV1-39P01597 117 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 IGKV1D-39P04432 117 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 S100GP29377 79 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 LAMTOR1Q6IAA8 161 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 OR1P1Q8NH06 330 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 ZNF414Q96IQ9 312 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 TSC22D3Q99576 134 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 SPAG8Q99932 426 aaPredicted RBP9.3□□□□□ -0.92
PDPN-208ENST00000509009 C20orf24Q9BUV8 137 aa9.3□□□□□ -0.92
PDPN-208ENST00000509009 IGHV3OR16-8A0A075B7F1 116 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 I3L2K1 104 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 ZNF207O43670 478 aaKnown RBP9.29□□□□□ -0.92
PDPN-208ENST00000509009 RCVRNP35243 200 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 RORCP51449 518 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 HSPE1P61604 102 aaKnown RBP9.29□□□□□ -0.92
PDPN-208ENST00000509009 Q56UQ5 140 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 H2BFWTQ7Z2G1 175 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 UBAC2Q8NBM4 344 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 OR4A16Q8NH70 328 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 UBQLN2Q9UHD9 624 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 SMPXQ9UHP9 88 aa9.29□□□□□ -0.92
PDPN-208ENST00000509009 C15orf62A8K5M9 175 aa9.28□□□□□ -0.92
PDPN-208ENST00000509009 M0QYG6 137 aa9.28□□□□□ -0.92
PDPN-208ENST00000509009 MFAP4P55083 255 aa9.28□□□□□ -0.92
PDPN-208ENST00000509009 TXN2Q99757 166 aa9.28□□□□□ -0.92
PDPN-208ENST00000509009 UBE2CO00762 179 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 CHEK1O14757 476 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 JTBO76095 146 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 MT-CO2P00403 227 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 IGHV3-48P01763 117 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 CTSDP07339 412 aaPredicted RBP9.27□□□□□ -0.93
PDPN-208ENST00000509009 FCGR2BP31994 310 aaPredicted RBP9.27□□□□□ -0.93
PDPN-208ENST00000509009 PRCDQ00LT1 54 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 IZUMO4Q1ZYL8 232 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 ODF3L2Q3SX64 289 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 Q6ZWC4 215 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 WFDC3Q8IUB2 231 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 MRGPRFQ96AM1 343 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 MISP3Q96FF7 219 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 NAA50Q9GZZ1 169 aaKnown RBP9.27□□□□□ -0.93
PDPN-208ENST00000509009 KLK11Q9UBX7 282 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 TP53TG1Q9Y2A0 90 aa9.27□□□□□ -0.93
PDPN-208ENST00000509009 IGHV7-4-1A0A0J9YVY3 117 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 OR4C46A6NHA9 309 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 FAM25AB3EWG3 89 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 FAM25CB3EWG5 89 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 FAM25GB3EWG6 89 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 NUPL2O15504 423 aaKnown RBP9.26□□□□□ -0.93
PDPN-208ENST00000509009 SPRY2O43597 315 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 ZNF182P17025 639 aaPredicted RBP9.26□□□□□ -0.93
PDPN-208ENST00000509009 PI3P19957 117 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 APOC4P55056 127 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 RND3P61587 244 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 ERHP84090 104 aaKnown RBP9.26□□□□□ -0.93
PDPN-208ENST00000509009 RELQ04864 619 aaPredicted RBP9.26□□□□□ -0.93
PDPN-208ENST00000509009 CTF1Q16619 201 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 MZT2AQ6P582 158 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 LHFPL1Q86WI0 220 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 ZNF114Q8NC26 417 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 TMEM116Q8NCL8 245 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 OR52I2Q8NH67 350 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 OR10C1Q96KK4 312 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 ABHD1Q96SE0 405 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 RNF2Q99496 336 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 RHPN1-AS1Q9BWJ2 59 aa9.26□□□□□ -0.93
PDPN-208ENST00000509009 NXF2Q9GZY0 626 aaKnown RBP9.26□□□□□ -0.93
PDPN-208ENST00000509009 PLECQ15149 4684 aaKnown RBP9.25□□□□□ -0.93
PDPN-208ENST00000509009 A0A0B4J293 547 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 KIR2DL5BA0A0G2JN68 375 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 KIR2DL5BA0A0G2JPC4 375 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 YIF1AO95070 293 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 IGKV1-5P01602 117 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 CD3DP04234 171 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 P0C879 139 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 PGAM2P15259 253 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 EWSR1Q01844 656 aaKnown RBP eCLIP9.25□□□□□ -0.93
PDPN-208ENST00000509009 TNFRSF9Q07011 255 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 RNASE12Q5GAN4 147 aaKnown RBP9.25□□□□□ -0.93
PDPN-208ENST00000509009 RNASE10Q5GAN6 216 aaKnown RBP9.25□□□□□ -0.93
PDPN-208ENST00000509009 KIR2DL5AQ8N109 375 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 KIR2DL5BQ8NHK3 375 aa9.25□□□□□ -0.93
PDPN-208ENST00000509009 RNF183Q96D59 192 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms