RNA–Protein interactions for RNA: ENST00000508461.5

SMG7-214, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SMG7, Length 3,985 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-214ENST00000508461 LINC01551Q86U37 167 aa10.63□□□□□ -0.71
SMG7-214ENST00000508461 OR5B3Q8NH48 314 aa10.63□□□□□ -0.71
SMG7-214ENST00000508461 VN1R17PQ8TDU5 208 aa10.63□□□□□ -0.71
SMG7-214ENST00000508461 NPIPB3Q92617 1050 aa10.63□□□□□ -0.71
SMG7-214ENST00000508461 ANKHD1Q8IWZ3 2542 aaKnown RBP10.63□□□□□ -0.71
SMG7-214ENST00000508461 A0A1B0GV90 55 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 CENPWQ5EE01 88 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 OR2T6Q8NHC8 308 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 IFI27L2Q9H2X8 130 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 IL19Q9UHD0 177 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 ADAMTS20P59510 1910 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 TRAV34A0A0B4J273 112 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 C15orf61A6NNL5 157 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 RBP4P02753 201 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 AMBPP02760 352 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 NUBP1P53384 320 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 RELBQ01201 579 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 PRR7Q8TB68 274 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 TBX15Q96SF7 602 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.716e-7■■■■■ 31.2
SMG7-214ENST00000508461 MOSP00540 346 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 SAA1P0DJI8 122 aaPredicted RBP10.62□□□□□ -0.71
SMG7-214ENST00000508461 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
SMG7-214ENST00000508461 RND2P52198 227 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
SMG7-214ENST00000508461 MRPL18Q9H0U6 180 aaKnown RBP10.62□□□□□ -0.71
SMG7-214ENST00000508461 ZMAT5Q9UDW3 170 aaKnown RBP10.62□□□□□ -0.71
SMG7-214ENST00000508461 KIAA1549Q9HCM3 1950 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 NDUFS6O75380 124 aaKnown RBP10.61□□□□□ -0.71
SMG7-214ENST00000508461 BSPH1Q075Z2 132 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 MBNL2Q5VZF2 373 aaKnown RBP10.61□□□□□ -0.71
SMG7-214ENST00000508461 HSPB9Q9BQS6 159 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 RNASE7Q9H1E1 156 aaKnown RBP10.61□□□□□ -0.71
SMG7-214ENST00000508461 ONECUT1Q9UBC0 465 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 MMP23AO75900 390 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 PAX5Q02548 391 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 SEBOXQ9HB31 216 aaPredicted RBP10.61□□□□□ -0.71
SMG7-214ENST00000508461 ZNF586Q9NXT0 402 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 RALYQ9UKM9 306 aaKnown RBP10.61□□□□□ -0.71
SMG7-214ENST00000508461 ZNF729A6NN14 1252 aaPredicted RBP10.61□□□□□ -0.71
SMG7-214ENST00000508461 VENTXO95231 258 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 MMD2Q8IY49 270 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 ZNF439Q8NDP4 499 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 ABHD17AQ96GS6 310 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 TXN2Q99757 166 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 CBLN4Q9NTU7 201 aa10.61□□□□□ -0.71
SMG7-214ENST00000508461 MUC3AQ02505 3323 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 DLX1P56177 255 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 LYZP61626 148 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 UTF1Q5T230 341 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 C10orf113Q5VZT2 155 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 AGMATQ9BSE5 352 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 TMEM242Q9NWH2 141 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 HCFC1P51610 2035 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 C15orf65H3BRN8 121 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 PPIHO43447 177 aaKnown RBP10.6□□□□□ -0.71
SMG7-214ENST00000508461 TIMP3P35625 211 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 ASPHD1Q5U4P2 390 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 RPEQ96AT9 228 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 GATCO43716 136 aaKnown RBP10.6□□□□□ -0.71
SMG7-214ENST00000508461 CA1P00915 261 aaPredicted RBP10.6□□□□□ -0.71
SMG7-214ENST00000508461 MSMPQ1L6U9 139 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 C1orf174Q8IYL3 243 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 TMEM256Q8N2U0 113 aa10.6□□□□□ -0.71
SMG7-214ENST00000508461 YTHDF2Q9Y5A9 579 aaKnown RBP10.6□□□□□ -0.71
SMG7-214ENST00000508461 TRAV5A0A0B4J249 113 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 HSBP1O75506 76 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 PFN1P07737 140 aaKnown RBP10.59□□□□□ -0.71
SMG7-214ENST00000508461 PRSS8Q16651 343 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 COL8A2P25067 703 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 IBA57Q5T440 356 aaKnown RBP10.59□□□□□ -0.71
SMG7-214ENST00000508461 PAXXQ9BUH6 204 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 VAMP8Q9BV40 100 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 INSIG2Q9Y5U4 225 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 K7EM74 188 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 STAG3L2P0CL84 134 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 STAG3L3P0CL85 134 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 CT45A6P0DMU7 189 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 CT45A5P0DMU8 189 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 CT45A7P0DMV0 189 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 MFAP2P55001 183 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 HLA-DRB5Q30154 266 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 ARSJQ5FYB0 599 aaPredicted RBP10.59□□□□□ -0.71
SMG7-214ENST00000508461 VSTM2AQ8TAG5 236 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 ASCL3Q9NQ33 180 aa10.59□□□□□ -0.71
SMG7-214ENST00000508461 TNRC6AQ8NDV7 1962 aaKnown RBP10.59□□□□□ -0.71
SMG7-214ENST00000508461 PYYP10082 97 aa10.58□□□□□ -0.71
SMG7-214ENST00000508461 USF1P22415 310 aaPredicted RBP10.58□□□□□ -0.71
SMG7-214ENST00000508461 TMEM170AQ8WVE7 144 aa10.58□□□□□ -0.71
SMG7-214ENST00000508461 SFXN3Q9BWM7 321 aa10.58□□□□□ -0.71
SMG7-214ENST00000508461 RNF224P0DH78 156 aa10.58□□□□□ -0.72
SMG7-214ENST00000508461 ADMP35318 185 aa10.58□□□□□ -0.72
SMG7-214ENST00000508461 BRWD1-AS2P59051 145 aa10.58□□□□□ -0.72
SMG7-214ENST00000508461 RNASEKQ6P5S7 137 aaKnown RBP10.58□□□□□ -0.72
SMG7-214ENST00000508461 MGAQ8IWI9 3026 aa10.58□□□□□ -0.72
SMG7-214ENST00000508461 CREBBPQ92793 2442 aa10.58□□□□□ -0.72
SMG7-214ENST00000508461 C8orf88P0DMB2 117 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms