RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 H2BFWTQ7Z2G1 175 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 OR4A16Q8NH70 328 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 SCARB1Q8WTV0 552 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 FAM110AQ9BQ89 295 aa10.82□□□□□ -0.68
HMGCS1-203ENST00000507004 C15orf62A8K5M9 175 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 NUPL2O15504 423 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 JTBO76095 146 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 SCAF4O95104 1147 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 BMI1P35226 326 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 APOC4P55056 127 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 NCS1P62166 190 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 ERHP84090 104 aaKnown RBP10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 PHLDA2Q53GA4 152 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 TBC1D26Q86UD7 250 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 SNX29P2Q8IUI4 249 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 ARRDC1Q8N5I2 433 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 ZNF114Q8NC26 417 aa10.81□□□□□ -0.68
HMGCS1-203ENST00000507004 OR2T8A6NH00 312 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 UBE2CO00762 179 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 B3GALNT1O75752 331 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 CD5P06127 495 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 MFAP4P55083 255 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 RND3P61587 244 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 VBP1P61758 197 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 Q56UQ5 140 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 RNASE10Q5GAN6 216 aaKnown RBP10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 SEC22AQ96IW7 307 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 TP53TG1Q9Y2A0 90 aa10.8□□□□□ -0.68
HMGCS1-203ENST00000507004 FAM25AB3EWG3 89 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 FAM25CB3EWG5 89 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 FAM25GB3EWG6 89 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 K7EIM0 57 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 ZNF182P17025 639 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 ELK1P19419 428 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 EDN2P20800 178 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 HSPE1P61604 102 aaKnown RBP10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 PRCDQ00LT1 54 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 C6orf62Q9GZU0 229 aaPredicted RBP10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 NSG2Q9Y328 171 aa10.79□□□□□ -0.68
HMGCS1-203ENST00000507004 KIR2DL5BA0A0G2JN68 375 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 KIR2DL5BA0A0G2JPC4 375 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 CORTO00230 105 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 HPGDSO60760 199 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 GABARAPO95166 117 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 MRPS10P82664 201 aaKnown RBP10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 Q6ZWC4 215 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 KIR2DL5AQ8N109 375 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 CCDC71LQ8N9Z2 235 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 UBAC2Q8NBM4 344 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 KIR2DL5BQ8NHK3 375 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 ZFAND1Q8TCF1 268 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 PDCD10Q9BUL8 212 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 C20orf24Q9BUV8 137 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 WFDC10AQ9H1F0 79 aa10.78□□□□□ -0.68
HMGCS1-203ENST00000507004 DNAH7Q8WXX0 4024 aa10.77□□□□□ -0.68
HMGCS1-203ENST00000507004 IGHV3-35A0A0C4DH35 117 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 INS-IGF2F8WCM5 200 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 SCGB2A1O75556 95 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 PGAM2P15259 253 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 NPBWR1P48145 328 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 SUB1P53999 127 aaKnown RBP eCLIP10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 MFAP2P55001 183 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 SSBP1Q04837 148 aaKnown RBP10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 WFDC3Q8IUB2 231 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 GINS3Q9BRX5 216 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 RETNQ9HD89 108 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 RABL2AQ9UBK7 228 aaPredicted RBP10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 MTFP1Q9UDX5 166 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 RABL2BQ9UNT1 228 aa10.77□□□□□ -0.69
HMGCS1-203ENST00000507004 GNG7O60262 68 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 CTSGP08311 255 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 ATF4P18848 351 aaPredicted RBP10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 ADMP35318 185 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 SNCAP37840 140 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 AKR1C2P52895 323 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 TAS2R19P59542 299 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 LHFPL1Q86WI0 220 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 MRGPRFQ96AM1 343 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 MISP3Q96FF7 219 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 OR10C1Q96KK4 312 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 CHRDL1Q9BU40 450 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 COPZ2Q9P299 210 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 EXTL2Q9UBQ6 330 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 SMPXQ9UHP9 88 aa10.76□□□□□ -0.69
HMGCS1-203ENST00000507004 F8W735 103 aaPredicted RBP10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 I3L2K1 104 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 PIGPP57054 158 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 PAFAH1B2P68402 229 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 TMEM217Q8N7C4 229 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 STPG3Q8N7X2 389 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 SLC35G3Q8N808 338 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 TMEM229BQ8NBD8 167 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 TMEM116Q8NCL8 245 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 DUSP18Q8NEJ0 188 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 TERB2Q8NHR7 220 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 RRNAD1Q96FB5 475 aaKnown RBP10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 GALNT14Q96FL9 552 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 OVOL2Q9BRP0 275 aa10.75□□□□□ -0.69
HMGCS1-203ENST00000507004 NXF2Q9GZY0 626 aaKnown RBP10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms