RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 ZNF701M0R085 212 aaPredicted RBP11.8□□□□□ -0.52
MED28-204ENST00000506409 UCP1P25874 307 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 S100A5P33763 92 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 MFAP2P55001 183 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 HSPE1P61604 102 aaKnown RBP11.8□□□□□ -0.52
MED28-204ENST00000506409 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 FAM106AQ4KMX7 169 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 PLET1Q6UQ28 207 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 Q8N402 240 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 RNASE11Q8TAA1 199 aaKnown RBP11.8□□□□□ -0.52
MED28-204ENST00000506409 DYNLRB2Q8TF09 96 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 RTBDNQ9BSG5 229 aaPredicted RBP11.8□□□□□ -0.52
MED28-204ENST00000506409 THAP7Q9BT49 309 aaPredicted RBP11.8□□□□□ -0.52
MED28-204ENST00000506409 C5orf66Q9H5L9 145 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 MCUBQ9NWR8 336 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 SLC2A8Q9NY64 477 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 SCP2D1Q9UJQ7 156 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 COL7A1Q02388 2944 aa11.8□□□□□ -0.52
MED28-204ENST00000506409 C2orf70A6NJV1 201 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 OR5AC1P0C628 307 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 P0C879 139 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 NHLRC4P0CG21 123 aaPredicted RBP11.79□□□□□ -0.52
MED28-204ENST00000506409 PYDC2Q56P42 97 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 ADAMTSL5Q6ZMM2 481 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 OR2C3Q8N628 320 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 OR2K2Q8NGT1 345 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 OR1P1Q8NH06 330 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 RRNAD1Q96FB5 475 aaKnown RBP11.79□□□□□ -0.52
MED28-204ENST00000506409 TMEM222Q9H0R3 208 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 NAA60Q9H7X0 242 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 PLEKHA3Q9HB20 300 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 GPR132Q9UNW8 380 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 V9GYH0 126 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 DNAH9Q9NYC9 4486 aa11.79□□□□□ -0.52
MED28-204ENST00000506409 IGHV3-21A0A0B4J1V1 117 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 A0A0B4J293 547 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 IZUMO1RA6ND01 250 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 TGOLN2O43493 480 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 FOLR2P14207 255 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 ERHP84090 104 aaKnown RBP11.78□□□□□ -0.52
MED28-204ENST00000506409 CD300EQ496F6 205 aaPredicted RBP11.78□□□□□ -0.52
MED28-204ENST00000506409 SPINK9Q5DT21 86 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 SCARB1Q8WTV0 552 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 ASCL2Q99929 193 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 PDCD10Q9BUL8 212 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 C21orf62Q9NYP8 219 aa11.78□□□□□ -0.52
MED28-204ENST00000506409 IGHV3-35A0A0C4DH35 117 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 TMEM213A2RRL7 107 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 OR2T8A6NH00 312 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 CRYM-AS1A6NIL9 109 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 A8MWP6 167 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 K7EIM0 57 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 ST8SIA3O43173 380 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 CDS2O95674 445 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 IFNA17P01571 189 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 FRMD6-AS1P0C7T7 363 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 EDN2P20800 178 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 CBLN1P23435 193 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 FAUP35544 74 aaKnown RBP11.77□□□□□ -0.53
MED28-204ENST00000506409 AP3S2P59780 193 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 DHODHQ02127 395 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 GTSCR1Q86UQ5 136 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 SGPP2Q8IWX5 399 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 Q8N1Y9 231 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 SLC35G3Q8N808 338 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 UBAC2Q8NBM4 344 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 ZNF114Q8NC26 417 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 GLYATL2Q8WU03 294 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 CACNG8Q8WXS5 425 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 TRIM63Q969Q1 353 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 BSCL2Q96G97 398 aaPredicted RBP11.77□□□□□ -0.53
MED28-204ENST00000506409 SCGB3A2Q96PL1 93 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 ATP6V0BQ99437 205 aa11.77□□□□□ -0.53
MED28-204ENST00000506409 A0A0G2JRQ6 117 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 IGHV4-30-4P0DP06 118 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 KLF9Q13886 244 aaPredicted RBP11.76□□□□□ -0.53
MED28-204ENST00000506409 ZNF79Q15937 498 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 DEFB114Q30KQ6 69 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 Q56UQ5 140 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 SPSB3Q6PJ21 355 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 UNQ9165/PRO28630Q6UXU0 137 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 CCDC190Q86UF4 302 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 FAM219AQ8IW50 185 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 TOMM5Q8N4H5 51 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 LHFPL5Q8TAF8 219 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 RBPMSQ93062 196 aaKnown RBP11.76□□□□□ -0.53
MED28-204ENST00000506409 PALMDQ9NP74 551 aa11.76□□□□□ -0.53
MED28-204ENST00000506409 TECRQ9NZ01 308 aaKnown RBP11.76□□□□□ -0.53
MED28-204ENST00000506409 SNCAP37840 140 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 HOXA1P49639 335 aaPredicted RBP11.75□□□□□ -0.53
MED28-204ENST00000506409 TM4SF20Q53R12 229 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 SPANXN2Q5MJ10 180 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 TMEM268Q5VZI3 342 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 SELENOHQ8IZQ5 122 aaKnown RBP11.75□□□□□ -0.53
MED28-204ENST00000506409 TMEM230Q96A57 120 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 KCNIP3Q9Y2W7 256 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 UFC1Q9Y3C8 167 aa11.75□□□□□ -0.53
MED28-204ENST00000506409 U3KQK5 164 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms