RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 COMMD5Q9GZQ3 224 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 NXF2Q9GZY0 626 aaKnown RBP8.67□□□□□ -1.02
LSM6-204ENST00000504181 BET1LQ9NYM9 111 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 HSF4Q9ULV5 492 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 SPATA2Q9UM82 520 aa8.67□□□□□ -1.02
LSM6-204ENST00000504181 PNMA8CA0A1B0GUJ8 204 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 FOXI3A8MTJ6 420 aaPredicted RBP8.66□□□□□ -1.02
LSM6-204ENST00000504181 F5H768 121 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 CD36P16671 472 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 QRFPP83859 136 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 TMEM69Q5SWH9 247 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 ZNF773Q6PK81 442 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 TOMM20LQ6UXN7 152 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 AMIGO2Q86SJ2 522 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 DCANP1Q8TF63 244 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 RNF141Q8WVD5 230 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 UHRF2Q96PU4 802 aa8.66□□□□□ -1.02
LSM6-204ENST00000504181 RBMX2Q9Y388 322 aaKnown RBP8.66□□□□□ -1.02
LSM6-204ENST00000504181 F11RQ9Y624 299 aaKnown RBP8.66□□□□□ -1.02
LSM6-204ENST00000504181 FCGR3AP08637 254 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 MRPS15P82914 257 aaKnown RBP8.65□□□□□ -1.02
LSM6-204ENST00000504181 RCN1Q15293 331 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 RNASE12Q5GAN4 147 aaKnown RBP8.65□□□□□ -1.02
LSM6-204ENST00000504181 TTC23Q5W5X9 447 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 TMPRSS11AQ6ZMR5 421 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 GPHA2Q96T91 129 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 URM1Q9BTM9 101 aaKnown RBP8.65□□□□□ -1.02
LSM6-204ENST00000504181 KRTAP9-2Q9BYQ4 174 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 FNDC4Q9H6D8 234 aaPredicted RBP8.65□□□□□ -1.02
LSM6-204ENST00000504181 TMEM231Q9H6L2 316 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 BABAM2Q9NXR7 383 aa8.65□□□□□ -1.02
LSM6-204ENST00000504181 HELTA6NFD8 242 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 H3BMM0 161 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 DIRAS3O95661 229 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 IGKV3-20P01619 116 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 IGLV2-14P01704 120 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 IGHV3-48P01763 117 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 GABRB1P18505 474 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 DCKP27707 260 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 ALDH3B2P48448 385 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 C1orf100Q5SVJ3 147 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 FAM89BQ8N5H3 189 aa8.64□□□□□ -1.03
LSM6-204ENST00000504181 UPK2O00526 184 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 OXTP01178 125 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 HBE1P02100 147 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 TRAPPC2P0DI81 140 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 TRAPPC2BP0DI82 140 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 CD37P11049 281 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 MFAP4P55083 255 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 DHRS2Q13268 280 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 ZIK1Q3SY52 487 aaPredicted RBP8.63□□□□□ -1.03
LSM6-204ENST00000504181 PLAC9Q5JTB6 97 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 SLC25A46Q96AG3 418 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 HSD17B10Q99714 261 aaKnown RBP8.63□□□□□ -1.03
LSM6-204ENST00000504181 HINT2Q9BX68 163 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 TAS2R8Q9NYW2 309 aa8.63□□□□□ -1.03
LSM6-204ENST00000504181 GNG7O60262 68 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 BPNT1O95861 308 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 CDK1P06493 297 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 DEFB130BP0DP73 79 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 DEFB130AP0DP74 79 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 P2RY1P47900 373 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 EIF4EBP1Q13541 118 aaPredicted RBP8.62□□□□□ -1.03
LSM6-204ENST00000504181 SSX1Q16384 188 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 OGFRL1Q5TC84 451 aaPredicted RBP8.62□□□□□ -1.03
LSM6-204ENST00000504181 THOC7Q6I9Y2 204 aaKnown RBP8.62□□□□□ -1.03
LSM6-204ENST00000504181 MISP3Q96FF7 219 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 Q96MT0 163 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 TMEM70Q9BUB7 260 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 FGF20Q9NP95 211 aaPredicted RBP8.62□□□□□ -1.03
LSM6-204ENST00000504181 OAZ3Q9UMX2 235 aa8.62□□□□□ -1.03
LSM6-204ENST00000504181 PKHD1L1Q86WI1 4243 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 DNAH8Q96JB1 4490 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 A0A087WTM6 91 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 IGKV1D-13A0A0B4J2D9 117 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 TEX50A0A1B0GTY4 177 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 A0A1W2PS18 150 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 SAC3D1A6NKF1 404 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 P0C879 139 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 IGKV1-13P0DP09 117 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 P2RY14Q15391 338 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 RRN3P1Q2M238 152 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 RBM48Q5RL73 367 aaKnown RBP8.61□□□□□ -1.03
LSM6-204ENST00000504181 C7orf50Q9BRJ6 194 aaKnown RBP8.61□□□□□ -1.03
LSM6-204ENST00000504181 UPK3BQ9BT76 320 aa8.61□□□□□ -1.03
LSM6-204ENST00000504181 MRPS18AQ9NVS2 196 aaKnown RBP8.61□□□□□ -1.03
LSM6-204ENST00000504181 IGKV1D-8A0A087WSZ0 117 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 TNFSF12O43508 249 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 HLA-DQB1P01920 261 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 HLA-DRB4P13762 266 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 CALB2P22676 271 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 NFYAP23511 347 aaPredicted RBP8.6□□□□□ -1.03
LSM6-204ENST00000504181 NPPCP23582 126 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 INSL4Q14641 139 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 GDF5OSQ5U4N7 250 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 HSD17B13Q7Z5P4 300 aaPredicted RBP8.6□□□□□ -1.03
LSM6-204ENST00000504181 C1orf158Q8N1D5 194 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 LSM10Q969L4 123 aaKnown RBP8.6□□□□□ -1.03
LSM6-204ENST00000504181 TXN2Q99757 166 aa8.6□□□□□ -1.03
LSM6-204ENST00000504181 AIFM2Q9BRQ8 373 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms