RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 OR52E5Q8NH55 327 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 KLK9Q9UKQ9 250 aa8.64□□□□□ -1.03
VCAN-205ENST00000503923 A0A1B0GU03 582 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 INS-IGF2F8WCM5 200 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 I3L521 148 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 OR2J3O76001 311 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 IGHV3-11P01762 117 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 HOXB5P09067 269 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 SLC25A6P12236 298 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 SPCS3P61009 180 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 ERHP84090 104 aaKnown RBP8.63□□□□□ -1.03
VCAN-205ENST00000503923 ATP5G2Q06055 141 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 PDLIM3Q53GG5 364 aaPredicted RBP8.63□□□□□ -1.03
VCAN-205ENST00000503923 PLET1Q6UQ28 207 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 C19orf35Q6ZS72 473 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 OR2C3Q8N628 320 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 OR1L6Q8NGR2 347 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 MITD1Q8WV92 249 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 FANCD2OSQ96PS1 177 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 OR5B12Q96R08 314 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 ENY2Q9NPA8 101 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 THYN1Q9P016 225 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 FBXL7Q9UJT9 491 aa8.63□□□□□ -1.03
VCAN-205ENST00000503923 F11RQ9Y624 299 aaKnown RBP8.63□□□□□ -1.03
VCAN-205ENST00000503923 IGLV11-55A0A075B6I3 123 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 CCL24O00175 119 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 IFNA21P01568 189 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 HOXA1P49639 335 aaPredicted RBP8.62□□□□□ -1.03
VCAN-205ENST00000503923 DEFA5Q01523 94 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 DEFB136Q30KP8 78 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 C15orf32Q32M92 178 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 SPINK9Q5DT21 86 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 ETV3LQ6ZN32 361 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 ZNF114Q8NC26 417 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 OR11H1Q8NG94 326 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 OR52B4Q8NGK2 314 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 OR1P1Q8NH06 330 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 OR1S1Q8NH92 325 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 ZNF431Q8TF32 576 aaPredicted RBP8.62□□□□□ -1.03
VCAN-205ENST00000503923 RAX2Q96IS3 184 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 P2RX4Q99571 388 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 PALMDQ9NP74 551 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 CMYA5Q8N3K9 4069 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 VWFP04275 2813 aa8.62□□□□□ -1.03
VCAN-205ENST00000503923 HSPB1P04792 205 aaKnown RBP8.61□□□□□ -1.03
VCAN-205ENST00000503923 IL5P05113 134 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 SNCAP37840 140 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 ZNF616Q08AN1 781 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 FHL3Q13643 280 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 EXOSC2Q13868 293 aaKnown RBP8.61□□□□□ -1.03
VCAN-205ENST00000503923 FAM209BQ5JX69 171 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 GGNBP1Q5YKI7 109 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 SLC25A24Q6NUK1 477 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 ZNF343Q6P1L6 599 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 OR1N2Q8NGR9 330 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 DPF1Q92782 380 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 CXorf58Q96LI9 332 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 DUX3Q96PT4 197 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 SEC22CQ9BRL7 303 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 HSPB7Q9UBY9 170 aa8.61□□□□□ -1.03
VCAN-205ENST00000503923 CEBPZOSA8MTT3 80 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 INMT-MINDY4F8WBC2 141 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 LINC01619G3V211 115 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 PRAF2O60831 178 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 PITX3O75364 302 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 ADAP1O75689 374 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 NXPH3O95157 252 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 NDUFB8O95169 186 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 OR8U8P0C7N1 319 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 SUB1P53999 127 aaKnown RBP eCLIP8.6□□□□□ -1.03
VCAN-205ENST00000503923 TNFRSF9Q07011 255 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 C12orf45Q8N5I9 185 aaPredicted RBP8.6□□□□□ -1.03
VCAN-205ENST00000503923 LINC00482Q8N8I6 264 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 EEF1AKMT3Q96AZ1 226 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 MARVELD1Q9BSK0 173 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 GPN1Q9HCN4 374 aaPredicted RBP8.6□□□□□ -1.03
VCAN-205ENST00000503923 RANGRFQ9HD47 186 aaPredicted RBP8.6□□□□□ -1.03
VCAN-205ENST00000503923 PEF1Q9UBV8 284 aaKnown RBP8.6□□□□□ -1.03
VCAN-205ENST00000503923 DMRT1Q9Y5R6 373 aa8.6□□□□□ -1.03
VCAN-205ENST00000503923 IGHV4OR15-8A0A075B7B6 117 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 A0A087WW49 117 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.59□□□□□ -1.03
VCAN-205ENST00000503923 ANKRD34BA5PLL1 514 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 FAM90A26D6RGX4 464 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 PTTG1O95997 202 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 CD33P20138 364 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 MFAP2P55001 183 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 UXS1Q8NBZ7 420 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 WFDC9Q8NEX5 89 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 VN1R17PQ8TDU5 208 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 HIPK2Q9H2X6 1198 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 HEYLQ9NQ87 328 aaPredicted RBP8.59□□□□□ -1.03
VCAN-205ENST00000503923 PKD1L1Q8TDX9 2849 aa8.59□□□□□ -1.03
VCAN-205ENST00000503923 TRBV7-1A0A0A6YYK4 115 aa8.58□□□□□ -1.04
VCAN-205ENST00000503923 MFSD2BA6NFX1 497 aa8.58□□□□□ -1.04
VCAN-205ENST00000503923 SNRPGP15A8MWD9 76 aa8.58□□□□□ -1.04
VCAN-205ENST00000503923 CORTO00230 105 aa8.58□□□□□ -1.04
VCAN-205ENST00000503923 MED6O75586 246 aa8.58□□□□□ -1.04
VCAN-205ENST00000503923 RNASE2P10153 161 aaKnown RBP8.58□□□□□ -1.04
VCAN-205ENST00000503923 ZP3P21754 424 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms