RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 TMEM61Q8N0U2 210 aa12.21□□□□□ -0.45
SCLT1-204ENST00000503215 CD300LFQ8TDQ1 290 aa12.21□□□□□ -0.45
SCLT1-204ENST00000503215 HIPK2Q9H2X6 1198 aa12.21□□□□□ -0.45
SCLT1-204ENST00000503215 COMMD9Q9P000 198 aa12.21□□□□□ -0.45
SCLT1-204ENST00000503215 TRBV7-1A0A0A6YYK4 115 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 IGHV3-21A0A0B4J1V1 117 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 MARCH11A6NNE9 402 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 OR11H12B2RN74 326 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 TAS2R46P59540 309 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 FAM106AQ4KMX7 169 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 SNX29P2Q8IUI4 249 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 LAX1Q8IWV1 398 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 HINT2Q9BX68 163 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 SLC2A8Q9NY64 477 aa12.2□□□□□ -0.46
SCLT1-204ENST00000503215 TECRQ9NZ01 308 aaKnown RBP12.2□□□□□ -0.46
SCLT1-204ENST00000503215 HPGDSO60760 199 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 SCAF4O95104 1147 aaKnown RBP12.19□□□□□ -0.46
SCLT1-204ENST00000503215 ELK1P19419 428 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 ERVK-16P61578 105 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 OR1L8Q8NGR8 309 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 CXorf58Q96LI9 332 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 SRSF8Q9BRL6 282 aaKnown RBP12.19□□□□□ -0.46
SCLT1-204ENST00000503215 SRD5A3Q9H8P0 318 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 NDUFA4L2Q9NRX3 87 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 CSMD3Q7Z407 3707 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 STARD9Q9P2P6 4700 aa12.19□□□□□ -0.46
SCLT1-204ENST00000503215 SACSQ9NZJ4 4579 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 A8MWP6 167 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 GPR31O00270 319 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 SERPINE2P07093 398 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 PTBP1P26599 531 aaKnown RBP eCLIP12.18□□□□□ -0.462e-8■■■■■ 40.2
SCLT1-204ENST00000503215 RCVRNP35243 200 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 ZNF57Q68EA5 555 aaPredicted RBP12.18□□□□□ -0.46
SCLT1-204ENST00000503215 SLC25A24Q6NUK1 477 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 BTNL8Q6UX41 500 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 GDPD1Q8N9F7 314 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 OR51B2Q9Y5P1 312 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 OR2T8A6NH00 312 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 RNASE12Q5GAN4 147 aaKnown RBP12.18□□□□□ -0.46
SCLT1-204ENST00000503215 PLET1Q6UQ28 207 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 CMTM1Q8IZ96 169 aa12.18□□□□□ -0.46
SCLT1-204ENST00000503215 RYR2Q92736 4967 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 IGHV3OR16-8A0A075B7F1 116 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 F8W735 103 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-204ENST00000503215 M0QYG6 137 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 IGKV1-39P01597 117 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 IGKV1D-39P04432 117 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 FGF2P09038 288 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 C8orf88P0DMB2 117 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 TSPAN5P62079 268 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 ZNF767PQ75MW2 155 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 VN1R17PQ8TDU5 208 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 ZNF414Q96IQ9 312 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 ST6GAL2Q96JF0 529 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 CHRDL1Q9BU40 450 aa12.17□□□□□ -0.46
SCLT1-204ENST00000503215 ZNF436Q9C0F3 470 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-204ENST00000503215 C6orf62Q9GZU0 229 aaPredicted RBP12.17□□□□□ -0.46
SCLT1-204ENST00000503215 TGOLN2O43493 480 aa12.16□□□□□ -0.46
SCLT1-204ENST00000503215 SNAPC5O75971 98 aa12.16□□□□□ -0.46
SCLT1-204ENST00000503215 IFNA6P05013 189 aa12.16□□□□□ -0.46
SCLT1-204ENST00000503215 TBC1D26Q86UD7 250 aa12.16□□□□□ -0.46
SCLT1-204ENST00000503215 TCTE3Q8IZS6 198 aa12.16□□□□□ -0.46
SCLT1-204ENST00000503215 SCARB1Q8WTV0 552 aa12.16□□□□□ -0.46
SCLT1-204ENST00000503215 SCPEP1Q9HB40 452 aa12.16□□□□□ -0.46
SCLT1-204ENST00000503215 F11RQ9Y624 299 aaKnown RBP12.16□□□□□ -0.46
SCLT1-204ENST00000503215 K7EIM0 57 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 ADMP35318 185 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 ASAH1Q13510 395 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 IZUMO4Q1ZYL8 232 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 NOXA1Q86UR1 476 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 OR52B4Q8NGK2 314 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 SUN5Q8TC36 379 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 LSM10Q969L4 123 aaKnown RBP12.15□□□□□ -0.46
SCLT1-204ENST00000503215 SEC22AQ96IW7 307 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 CMTM3Q96MX0 182 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 TMEM14BQ9NUH8 114 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 THYN1Q9P016 225 aa12.15□□□□□ -0.46
SCLT1-204ENST00000503215 LCE6AA0A183 80 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 ZNF207O43670 478 aaKnown RBP12.14□□□□□ -0.47
SCLT1-204ENST00000503215 IL7P13232 177 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 PI3P19957 117 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 RORCP51449 518 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 SLC16A13Q7RTY0 426 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 TMEM190Q8WZ59 177 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 C21orf62Q9NYP8 219 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 MRPL27Q9P0M9 148 aaKnown RBP12.14□□□□□ -0.47
SCLT1-204ENST00000503215 KLK11Q9UBX7 282 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 PRNDQ9UKY0 176 aa12.14□□□□□ -0.47
SCLT1-204ENST00000503215 C15orf61A6NNL5 157 aa12.13□□□□□ -0.47
SCLT1-204ENST00000503215 IGHV3-48P01763 117 aa12.13□□□□□ -0.47
SCLT1-204ENST00000503215 UCP3P55916 312 aa12.13□□□□□ -0.47
SCLT1-204ENST00000503215 HSD17B13Q7Z5P4 300 aaPredicted RBP12.13□□□□□ -0.47
SCLT1-204ENST00000503215 UBAC2Q8NBM4 344 aa12.13□□□□□ -0.47
SCLT1-204ENST00000503215 OR52I2Q8NH67 350 aa12.13□□□□□ -0.47
SCLT1-204ENST00000503215 MRGPRFQ96AM1 343 aa12.13□□□□□ -0.47
SCLT1-204ENST00000503215 UFC1Q9Y3C8 167 aa12.13□□□□□ -0.47
SCLT1-204ENST00000503215 AP2S1P53680 142 aaPredicted RBP12.12□□□□□ -0.47
SCLT1-204ENST00000503215 ELLP55199 621 aaPredicted RBP12.12□□□□□ -0.47
SCLT1-204ENST00000503215 LPCAT3Q6P1A2 487 aa12.12□□□□□ -0.47
SCLT1-204ENST00000503215 OR5B3Q8NH48 314 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms