RNA–Protein interactions for RNA: ENST00000503057.5

LIMCH1-205, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-205ENST00000503057 IMMP2LQ96T52 175 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 LIME1Q9H400 295 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 GSN-AS1Q9NRJ2 163 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 METRNQ9UJH8 293 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 PEX7O00628 323 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 PMCHL1Q16048 86 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 Q6ZSR3 168 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 LYPD6Q86Y78 171 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 AGMATQ9BSE5 352 aa8.93□□□□□ -0.98
LIMCH1-205ENST00000503057 TAS2R60P59551 318 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 NEU4Q8WWR8 484 aaPredicted RBP8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 RABAC1Q9UI14 185 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 RPUSD1Q9UJJ7 312 aaKnown RBP8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 PI4KAP42356 2102 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 GRIFINA4D1Z8 144 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 C1QTNF9BB2RNN3 333 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 IGHV3-48P01763 117 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 PTTG1IPP53801 180 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 EFNB3Q15768 340 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 PGLYRP4Q96LB8 373 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 LPAR2Q9HBW0 351 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 MED12Q93074 2177 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 TRBV24-1A0A075B6N3 115 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 SSC4DQ8WTU2 575 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 CBY1Q9Y3M2 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BKO60814 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 OR2J3O76001 311 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BJP06899 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BOP23527 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 LMO1P25800 156 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 FCER1GP30273 86 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BBP33778 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BDP58876 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BCP62807 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST2H2BEQ16778 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BHQ93079 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 FMC1Q96HJ9 113 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BNQ99877 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 HIST1H2BMQ99879 126 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 DPM3Q9P2X0 92 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 UFC1Q9Y3C8 167 aa8.92□□□□□ -0.98
LIMCH1-205ENST00000503057 SLC17A3O00476 420 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 TCAPO15273 167 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 NBEAP1P0C6P0 100 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 RPL7P18124 248 aaKnown RBP8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 RPS20P60866 119 aaKnown RBP8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 PLA2G2CQ5R387 149 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 C10orf91Q5T1B1 145 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 TMEM133Q9H2Q1 129 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 RFNGQ9Y644 331 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 LINC00473A8K010 186 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 J3QR89 54 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 CD69Q07108 199 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 ZNF585BQ52M93 769 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 UNQ5815/PRO19632Q6UWF5 114 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 RPP25LQ8N5L8 163 aaKnown RBP8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 SSBP3Q9BWW4 388 aaPredicted RBP8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 RAB9AP51151 201 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 KRTAP27-1Q3LI81 207 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 ZCCHC14Q8WYQ9 949 aaKnown RBP8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 TNFRSF14Q92956 283 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 METTL26Q96S19 204 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 GGTLC1Q9BX51 225 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 IGKV1D-17A0A075B6S4 117 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 TMSB15BA0A087X1C1 80 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 ZNF503-AS2A6NEH8 195 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 STAG3L2P0CL84 134 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 STAG3L3P0CL85 134 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 SPATA45Q537H7 98 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 Q6ZRM9 215 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 FBXL15Q9H469 300 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 GOLT1BQ9Y3E0 138 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 HBBP68871 147 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 TEX45Q8NA69 505 aa8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 RNASE6Q93091 150 aaKnown RBP8.91□□□□□ -0.98
LIMCH1-205ENST00000503057 TWIST1Q15672 202 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 TBR1Q16650 682 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 GCSAMLQ5JQS6 135 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 MAP1BP46821 2468 aaKnown RBP8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 A0A1W2PRE2 83 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 CXCL1P09341 107 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 GATA2P23769 480 aaPredicted RBP8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 IL15RAQ13261 267 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 C2orf83Q53S99 150 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 OR4C5Q8NGB2 326 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 TCRBV4S1A1TA0A5B7 111 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 SPSB3Q6PJ21 355 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 DMRTA2Q96SC8 542 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 VKORC1Q9BQB6 163 aa8.9□□□□□ -0.98
LIMCH1-205ENST00000503057 IL4P05112 153 aa8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 C1QTNF9P0C862 333 aa8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 RELBQ01201 579 aa8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 PET117Q6UWS5 81 aa8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 GOLT1AQ6ZVE7 132 aa8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 Q8NFD4 153 aa8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 EAF1Q96JC9 268 aaPredicted RBP8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 SOX21Q9Y651 276 aaPredicted RBP8.9□□□□□ -0.99
LIMCH1-205ENST00000503057 ITGB1BP1O14713 200 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms