RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 OR52E5Q8NH55 327 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 PDCD10Q9BUL8 212 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 CACNG5Q9UF02 275 aa12.04□□□□□ -0.48
CPNE1-228ENST00000498814 IGLV11-55A0A075B6I3 123 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 INS-IGF2F8WCM5 200 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 CYB5BO43169 146 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 OR2J3O76001 311 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 DUS4LO95620 317 aaKnown RBP12.03□□□□□ -0.48
CPNE1-228ENST00000498814 IFNA17P01571 189 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 DEFA5Q01523 94 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 ATP5G2Q06055 141 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 C4orf46Q504U0 113 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 PDLIM3Q53GG5 364 aaPredicted RBP12.03□□□□□ -0.48
CPNE1-228ENST00000498814 ZNF343Q6P1L6 599 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 DUX3Q96PT4 197 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 PLEKHA3Q9HB20 300 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 NUDT15Q9NV35 164 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 CACFD1Q9UGQ2 172 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 FBXL7Q9UJT9 491 aa12.03□□□□□ -0.48
CPNE1-228ENST00000498814 F11RQ9Y624 299 aaKnown RBP12.03□□□□□ -0.48
CPNE1-228ENST00000498814 NOTCH3Q9UM47 2321 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 TRAV6A0A075B6T7 132 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 A0A1B0GU03 582 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 HSPB1P04792 205 aaKnown RBP12.02□□□□□ -0.49
CPNE1-228ENST00000498814 H2AFB2P0C5Z0 115 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 DEFA1P59665 94 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 DEFA3P59666 94 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 SPCS3P61009 180 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 ERHP84090 104 aaKnown RBP12.02□□□□□ -0.49
CPNE1-228ENST00000498814 ZNF616Q08AN1 781 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 SMCO1Q147U7 214 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 OR2C3Q8N628 320 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 OR1L6Q8NGR2 347 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 DPF1Q92782 380 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 TMED3Q9Y3Q3 217 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 DMRT1Q9Y5R6 373 aa12.02□□□□□ -0.49
CPNE1-228ENST00000498814 NDUFB8O95169 186 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 OR8U8P0C7N1 319 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 SLC25A6P12236 298 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 CD33P20138 364 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 C15orf32Q32M92 178 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 SPINK9Q5DT21 86 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 ZNF114Q8NC26 417 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 DUSP18Q8NEJ0 188 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 OR1P1Q8NH06 330 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 COQ8AQ8NI60 647 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 ENKURQ8TC29 256 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 RANGRFQ9HD47 186 aaPredicted RBP12.01□□□□□ -0.49
CPNE1-228ENST00000498814 THYN1Q9P016 225 aa12.01□□□□□ -0.49
CPNE1-228ENST00000498814 IGHV4OR15-8A0A075B7B6 117 aa12□□□□□ -0.49
CPNE1-228ENST00000498814 A0A087WW49 117 aa12□□□□□ -0.49
CPNE1-228ENST00000498814 LINC01619G3V211 115 aa12□□□□□ -0.49
CPNE1-228ENST00000498814 MFAP2P55001 183 aa12□□□□□ -0.49
CPNE1-228ENST00000498814 EXOSC2Q13868 293 aaKnown RBP12□□□□□ -0.49
CPNE1-228ENST00000498814 SLC25A24Q6NUK1 477 aa12□□□□□ -0.49
CPNE1-228ENST00000498814 MITD1Q8WV92 249 aa12□□□□□ -0.49
CPNE1-228ENST00000498814 ENY2Q9NPA8 101 aa12□□□□□ -0.49
CPNE1-228ENST00000498814 PEF1Q9UBV8 284 aaKnown RBP12□□□□□ -0.49
CPNE1-228ENST00000498814 ANKRD34BA5PLL1 514 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 PITX3O75364 302 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 HOXB5P09067 269 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 HOXA1P49639 335 aaPredicted RBP11.99□□□□□ -0.49
CPNE1-228ENST00000498814 NRARPQ7Z6K4 114 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 OR52B4Q8NGK2 314 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 CXorf58Q96LI9 332 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 HSPB7Q9UBY9 170 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 FBN3Q75N90 2809 aa11.99□□□□□ -0.49
CPNE1-228ENST00000498814 NOTCH1P46531 2555 aa11.98□□□□□ -0.49
CPNE1-228ENST00000498814 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.98□□□□□ -0.49
CPNE1-228ENST00000498814 SNCAP37840 140 aa11.98□□□□□ -0.49
CPNE1-228ENST00000498814 TNFRSF9Q07011 255 aa11.98□□□□□ -0.49
CPNE1-228ENST00000498814 GGNBP1Q5YKI7 109 aa11.98□□□□□ -0.49
CPNE1-228ENST00000498814 OR1S1Q8NH92 325 aa11.98□□□□□ -0.49
CPNE1-228ENST00000498814 VN1R17PQ8TDU5 208 aa11.98□□□□□ -0.49
CPNE1-228ENST00000498814 ZNF431Q8TF32 576 aaPredicted RBP11.98□□□□□ -0.49
CPNE1-228ENST00000498814 EEF1AKMT3Q96AZ1 226 aa11.98□□□□□ -0.49
CPNE1-228ENST00000498814 RCC1LQ96I51 464 aaKnown RBP11.98□□□□□ -0.49
CPNE1-228ENST00000498814 TRBV7-1A0A0A6YYK4 115 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 MFSD2BA6NFX1 497 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 CEBPZOSA8MTT3 80 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 ADAP1O75689 374 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 TRBV12-3P01733 135 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 IL5P05113 134 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 ZP3P21754 424 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 SUB1P53999 127 aaKnown RBP eCLIP11.97□□□□□ -0.491e-12■■■■□ 22.8
CPNE1-228ENST00000498814 SLURP1P55000 103 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 BSXQ3C1V8 233 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 PVRIGQ6DKI7 326 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 CCDC140Q96MF4 163 aa11.97□□□□□ -0.49
CPNE1-228ENST00000498814 FAM90A26D6RGX4 464 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 IFNA21P01568 189 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.49
CPNE1-228ENST00000498814 HOXD3P31249 432 aaPredicted RBP11.96□□□□□ -0.49
CPNE1-228ENST00000498814 HTR2BP41595 481 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 PLET1Q6UQ28 207 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 ZNF502Q8TBZ5 544 aa11.96□□□□□ -0.49
CPNE1-228ENST00000498814 DCUN1D4Q92564 292 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms