RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 SPC24Q8NBT2 197 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 OR10W1Q8NGF6 305 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 OR13C3Q8NGS6 347 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 OR52N1Q8NH53 320 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 RNASE8Q8TDE3 154 aaKnown RBP2.76□□□□□ -1.97
CSTF1-207ENST00000498689 UQCC2Q9BRT2 126 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 NXF2Q9GZY0 626 aaKnown RBP2.76□□□□□ -1.97
CSTF1-207ENST00000498689 ARMC1Q9NVT9 282 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 STEAP1Q9UHE8 339 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 URGCP-MRPS24S4R325 110 aa2.76□□□□□ -1.97
CSTF1-207ENST00000498689 A0A1B0GU03 582 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 UBDO15205 165 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 GPX5O75715 221 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 BAG2O95816 211 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 TCP1P17987 556 aaKnown RBP2.75□□□□□ -1.97
CSTF1-207ENST00000498689 SLC1A6P48664 564 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 MRPL19P49406 292 aaKnown RBP2.75□□□□□ -1.97
CSTF1-207ENST00000498689 PPP5CP53041 499 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 RELQ04864 619 aaPredicted RBP2.75□□□□□ -1.97
CSTF1-207ENST00000498689 SF3A3Q12874 501 aaKnown RBP eCLIP2.75□□□□□ -1.97
CSTF1-207ENST00000498689 RSU1Q15404 277 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 HMGN3Q15651 99 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 SPINK13Q1W4C9 94 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 SPINK9Q5DT21 86 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 IGSF11Q5DX21 431 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 SLC25A24Q6NUK1 477 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 WDR93Q6P2C0 686 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 NEGR1Q7Z3B1 354 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 TMEM256Q8N2U0 113 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 PARP16Q8N5Y8 322 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 C9orf163Q8N9P6 203 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 OR51A4Q8NGJ6 313 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 LYPD6BQ8NI32 183 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 IL22RA2Q969J5 263 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 DPH3Q96FX2 82 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 C16orf74Q96GX8 76 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 ABHD1Q96SE0 405 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 EBF4Q9BQW3 602 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 TSSK6Q9BXA6 273 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 RAB17Q9H0T7 212 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 IL1RAPQ9NPH3 570 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 KCNIP1Q9NZI2 227 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 HAO1Q9UJM8 370 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 ENPP4Q9Y6X5 453 aa2.75□□□□□ -1.97
CSTF1-207ENST00000498689 ZNF98A6NK75 572 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 MCRIP1C9JLW8 97 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 SC5DO75845 299 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 KBTBD11O94819 623 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 MT-ND2P03891 347 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 SHBGP04278 402 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 ALPLP05186 524 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 ABHD2P08910 425 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 OCM2P0CE71 109 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 OCMP0CE72 109 aaPredicted RBP2.74□□□□□ -1.97
CSTF1-207ENST00000498689 SRMP19623 302 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 SERPINA2P20848 420 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 UCP1P25874 307 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 CAPGP40121 348 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 CEACAM6P40199 344 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 SNRPD3P62318 126 aaKnown RBP2.74□□□□□ -1.97
CSTF1-207ENST00000498689 BLOC1S1P78537 153 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 TSPAN31Q12999 210 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 NHLRC3Q5JS37 347 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 RAB12Q6IQ22 244 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 NOXA1Q86UR1 476 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 INO80EQ8NBZ0 244 aaPredicted RBP2.74□□□□□ -1.97
CSTF1-207ENST00000498689 SPATA4Q8NEY3 305 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 PXT1Q8NFP0 134 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 BLNKQ8WV28 456 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 TNFAIP8L1Q8WVP5 186 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 LINC00052Q96N35 136 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 IL4I1Q96RQ9 567 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 ZNF184Q99676 751 aaPredicted RBP2.74□□□□□ -1.97
CSTF1-207ENST00000498689 GINS3Q9BRX5 216 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 OR51E2Q9H255 320 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 CMC2Q9NRP2 79 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 MRGBPQ9NV56 204 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 SDHAF2Q9NX18 166 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 IL20Q9NYY1 176 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 PLAC8Q9NZF1 115 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 NDUFAF4Q9P032 175 aa2.74□□□□□ -1.97
CSTF1-207ENST00000498689 RIIAD1A6NNX1 92 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 DIRC3C9JPN6 131 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 K7EQD1 137 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 ITGB1BP1O14713 200 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 INSP01308 110 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 IGHV3-53P01767 116 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 RLN2P04090 185 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 SLC2A5P22732 501 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 CXCR4P61073 352 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 ZNF85Q03923 595 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 MRPL23Q16540 153 aaKnown RBP2.73□□□□□ -1.97
CSTF1-207ENST00000498689 RTL8BQ17RB0 113 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 IFI44LQ53G44 452 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 DPPA3Q6W0C5 159 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 FOXI2Q6ZQN5 318 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 TMEM144Q7Z5S9 345 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 CNPY4Q8N129 248 aa2.73□□□□□ -1.97
CSTF1-207ENST00000498689 AQP11Q8NBQ7 271 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms