RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TMEM116Q8NCL8 245 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR4C13Q8NGP0 309 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 FAM110DQ8TAY7 271 aaPredicted RBP6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 DMRTA2Q96SC8 542 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 BPESC1Q9GZL8 116 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 JPT1Q9UK76 154 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 A0A1W2PPE3 182 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 K7N7A8 449 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 TRIOO75962 3097 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 PLAUP00749 431 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 HIST1H1EP10412 219 aaKnown RBP6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 CRISP2P16562 243 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 G0S2P27469 103 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 RNF151Q2KHN1 245 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGF2-ASQ6U949 168 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 EML6Q6ZMW3 1958 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 C5orf24Q7Z6I8 188 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 GCSAMQ8N6F7 178 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 MEGF10Q96KG7 1140 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 XIRP2A4UGR9 3374 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 HPRT1P00492 218 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 F12P00748 615 aaPredicted RBP6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 MC5RP33032 325 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 ERVK11-1P61568 191 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 TNFRSF9Q07011 255 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 C10orf113Q5VZT2 155 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 ZNF880Q6PDB4 577 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 SLC25A33Q9BSK2 321 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 WFDC1Q9HC57 220 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 ZDHHC8Q9ULC8 765 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 SLC25A15Q9Y619 301 aa6.68□□□□□ -1.34
HLA-DMB-262ENST00000498020 CTXND1A0A1B0GTU2 59 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 RPL27AP46776 148 aaKnown RBP6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 DSCR9P59020 149 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 AWAT1Q58HT5 328 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 TMEM191AQ9H0A3 160 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 MBNL3Q9NUK0 354 aaKnown RBP6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 C7orf77A4D0Y5 90 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 B4DEV8 164 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 NDUFA2O43678 99 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 RD3LP0DJH9 198 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 FHITP49789 147 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 TMEM183BQ1AE95 376 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 KHDC3LQ587J8 217 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR1L6Q8NGR2 347 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 ANAPC16Q96DE5 110 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 ZNF714Q96N38 554 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 EXPH5Q8NEV8 1989 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 PSPNO60542 156 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 CSN3P07498 182 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 RPL7P18124 248 aaKnown RBP6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 SSTR5P35346 364 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 TMEM97Q5BJF2 176 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 IGFL3Q6UXB1 125 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR13A1Q8NGR1 328 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 RHOVQ96L33 236 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 SLX1AQ9BQ83 275 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 TMEM106BQ9NUM4 274 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 HELTA6NFD8 242 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 MLNRO43193 412 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 TFPI2P48307 235 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 SSBP3Q9BWW4 388 aaPredicted RBP6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 RBKSQ9H477 322 aa6.67□□□□□ -1.34
HLA-DMB-262ENST00000498020 PDE6DO43924 150 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 TCL1AP56279 114 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 SELENOTP62341 195 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 PMS2P11Q13670 270 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 BRD3OSQ6XYD6 125 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 PSMG3Q9BT73 122 aaPredicted RBP6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 CALYQ9NYX4 217 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 S1PR2O95136 353 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 PTBP3O95758 552 aaKnown RBP6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 CXorf1O96002 111 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 LMO1P25800 156 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 ID1P41134 155 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 HERVK_113P61574 105 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 LRRC75BQ2VPJ9 315 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 WDR86Q86TI4 376 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 NPVFQ9HCQ7 196 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 SRRM5B3KS81 715 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 CORTO00230 105 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 SRSF3P84103 164 aaKnown RBP6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 TAF15Q92804 592 aaKnown RBP eCLIP6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 RSG1Q9BU20 258 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 GSX1Q9H4S2 264 aaPredicted RBP6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 REV3LO60673 3130 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 ADAMTS20P59510 1910 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 PAGE4O60829 102 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 HYPMO75409 117 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 HSPB1P04792 205 aaKnown RBP6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 CD5P06127 495 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 ELOBQ15370 118 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 MMD2Q8IY49 270 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 OR4X2Q8NGF9 303 aa6.66□□□□□ -1.34
HLA-DMB-262ENST00000498020 M0R143 59 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 LIPFP07098 398 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 MST1LQ2TV78 715 aa6.65□□□□□ -1.34
HLA-DMB-262ENST00000498020 TMEM30BQ3MIR4 351 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms