RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 NHLH2Q02577 135 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 C10orf55Q5SWW7 151 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 ZNF562Q6V9R5 426 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 SLC51BQ86UW2 128 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 OR5R1Q8NH85 324 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 SPATA3Q8NHX4 192 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 SRSF12Q8WXF0 261 aaKnown RBP11.25□□□□□ -0.61
VPS26A-209ENST00000497564 SLC25A33Q9BSK2 321 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 HINT2Q9BX68 163 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 CYTL1Q9NRR1 136 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 FBXL17Q9UF56 701 aa11.25□□□□□ -0.61
VPS26A-209ENST00000497564 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 TEX22C9J3V5 150 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 OPN1MWP04001 364 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 METTL15P1P0C7V9 234 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 OPN1MW2P0DN77 364 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 OPN1MW3P0DN78 364 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 ERHP84090 104 aaKnown RBP11.24□□□□□ -0.61
VPS26A-209ENST00000497564 TMEM267Q0VDI3 215 aaPredicted RBP11.24□□□□□ -0.61
VPS26A-209ENST00000497564 HAPLN4Q86UW8 402 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
VPS26A-209ENST00000497564 C5orf56Q8N8D9 126 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 ZNF114Q8NC26 417 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 SLC24A4Q8NFF2 622 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 OR10W1Q8NGF6 305 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 BSCL2Q96G97 398 aaPredicted RBP11.24□□□□□ -0.61
VPS26A-209ENST00000497564 RASL11BQ9BPW5 248 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 SLA2Q9H6Q3 261 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 ESM1Q9NQ30 184 aa11.24□□□□□ -0.61
VPS26A-209ENST00000497564 FBN3Q75N90 2809 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 MDFIC2A0A1B0GVS7 189 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 M0QZK8 103 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 CST7O76096 145 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 IFNA10P01566 189 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 NPY1RP25929 384 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 IER3P46695 156 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 RAB11AP62491 216 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 UBA52P62987 128 aaKnown RBP11.23□□□□□ -0.61
VPS26A-209ENST00000497564 HBG1P69891 147 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 HBG2P69892 147 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 WT1-ASQ06250 92 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 C2orf83Q53S99 150 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 Q6YL49 198 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 OR1S2Q8NGQ3 325 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 OR5C1Q8NGR4 320 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 STOML3Q8TAV4 291 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 TMEM170AQ8WVE7 144 aa11.23□□□□□ -0.61
VPS26A-209ENST00000497564 IGHV7-81A0A0B4J1V7 117 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 PRSS46E5RG02 174 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 JTBO76095 146 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 CNIH1O95406 144 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 OR8U8P0C7N1 319 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 RNASE2P10153 161 aaKnown RBP11.22□□□□□ -0.61
VPS26A-209ENST00000497564 HILS1P60008 231 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 GNB1P62873 340 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 IFITM2Q01629 132 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 ARL16Q0P5N6 197 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 FXYD3Q14802 87 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 ATP6V1FQ16864 119 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 PVRIGQ6DKI7 326 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 UBAC2Q8NBM4 344 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 ZNF418Q8TF45 676 aaPredicted RBP11.22□□□□□ -0.61
VPS26A-209ENST00000497564 ARPC1AQ92747 370 aa11.22□□□□□ -0.61
VPS26A-209ENST00000497564 PINX1Q96BK5 328 aaKnown RBP11.22□□□□□ -0.61
VPS26A-209ENST00000497564 ZNF48Q96MX3 618 aaPredicted RBP11.22□□□□□ -0.61
VPS26A-209ENST00000497564 ZNF471Q9BX82 626 aaPredicted RBP11.22□□□□□ -0.61
VPS26A-209ENST00000497564 DFFBO76075 338 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 AMY1AP04745 511 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 OR13C7P0DN81 318 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 SNCAP37840 140 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 SUB1P53999 127 aaKnown RBP eCLIP11.21□□□□□ -0.61
VPS26A-209ENST00000497564 EIF5AP63241 154 aaKnown RBP11.21□□□□□ -0.61
VPS26A-209ENST00000497564 CX3CL1P78423 397 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 SLC38A11Q08AI6 406 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 ZNF266Q14584 549 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 TMEM219Q86XT9 240 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 TMEM217Q8N7C4 229 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 SIGLECL1Q8N7X8 197 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 OR10P1Q8NGE3 313 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 SSMEM1Q8WWF3 244 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 ST8SIA2Q92186 375 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 ATP5SQ99766 215 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 GGACTQ9BVM4 153 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 SMIM3Q9BZL3 60 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 ARV1Q9H2C2 271 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 WFDC1Q9HC57 220 aa11.21□□□□□ -0.61
VPS26A-209ENST00000497564 BORCS7-ASMTA0A0B4J1R7 106 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 FNDC10F2Z333 226 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 RGS13O14921 159 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 IGHV4-59P01825 116 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 TPT1P13693 172 aaKnown RBP11.2□□□□□ -0.62
VPS26A-209ENST00000497564 NDPQ00604 133 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 LY6EQ16553 131 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 VWC2Q2TAL6 325 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 RPL7L1Q6DKI1 246 aaKnown RBP11.2□□□□□ -0.62
VPS26A-209ENST00000497564 TEX261Q6UWH6 196 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 ETV3LQ6ZN32 361 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 TMEM86BQ8N661 226 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 DUX5Q96PT3 197 aa11.2□□□□□ -0.62
VPS26A-209ENST00000497564 PARD6GQ9BYG4 376 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms