RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 FUT9Q9Y231 359 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 DOCK11Q5JSL3 2073 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 SYNGR2O43760 224 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 CA7P43166 264 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 GALR1P47211 349 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 GNB2P62879 340 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 UNQ5815/PRO19632Q6UWF5 114 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 DPPA3Q6W0C5 159 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 RPP25LQ8N5L8 163 aaKnown RBP9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 MBD3L1Q8WWY6 194 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 SRD5A3Q9H8P0 318 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 SLC25A22Q9H936 323 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 NGBQ9NPG2 151 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 RAXQ9Y2V3 346 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 ZFHX4Q86UP3 3567 aa9.54□□□□□ -0.88
SNRNP200-208ENST00000497539 A0A1B0GUS0 222 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 SPRY3O43610 288 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 MT-CO2P00403 227 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 IGKV1-5P01602 117 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 PMS2P11Q13670 270 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 FAM71F2Q6NXP2 309 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 NINJ1Q92982 152 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 RAB40CQ96S21 281 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 TANC2Q9HCD6 1990 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 RPL23P62829 140 aaKnown RBP9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 BSPH1Q075Z2 132 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 CATR1Q13166 79 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 OR51G1Q8NGK1 321 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 AGMATQ9BSE5 352 aa9.53□□□□□ -0.88
SNRNP200-208ENST00000497539 CACNA1DQ01668 2161 aa9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 PIEZO1Q92508 2521 aa9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 H7BYZ3 331 aa9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 FAM3BP58499 235 aaPredicted RBP9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 HOXA4Q00056 320 aaPredicted RBP9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 HSD17B10Q99714 261 aaKnown RBP9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 NAT8Q9UHE5 227 aa9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 KCNS2Q9ULS6 477 aa9.52□□□□□ -0.88
SNRNP200-208ENST00000497539 LOC102724200A0A096LPH7 203 aaPredicted RBP9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 C17orf100A8MU93 164 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF705FA8MVS1 300 aaPredicted RBP9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF705DP0CH99 300 aaPredicted RBP9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF705BP0CI00 300 aaPredicted RBP9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 TNFRSF1AP19438 455 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 SSTR5P35346 364 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 EFNB3Q15768 340 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 VAMP3Q15836 100 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 LRRC75BQ2VPJ9 315 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF788Q6ZQV5 615 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 OR4F5Q8NH21 305 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 EAF1Q96JC9 268 aaPredicted RBP9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 GAFA1Q96PS6 74 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 OR4F4Q96R69 305 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 OR2D2Q9H210 308 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 BET1LQ9NYM9 111 aa9.52□□□□□ -0.89
SNRNP200-208ENST00000497539 GAGE12BA1L429 117 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 TFF1P04155 84 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 CD33P20138 364 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 LOXL3P58215 753 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 MEF2BQ02080 365 aaPredicted RBP9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 TMEM177Q53S58 311 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 TMEM41BQ5BJD5 291 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 OR5B12Q96R08 314 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 WDR61Q9GZS3 305 aaKnown RBP9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 CTDSP1Q9GZU7 261 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 PARLQ9H300 379 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 FAM90A9PA6NNJ1 464 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 AZU1P20160 251 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 FAM53AQ6NSI3 398 aaPredicted RBP9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 ACSM6Q6P461 480 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 TAF15Q92804 592 aaKnown RBP eCLIP9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 IMMP2LQ96T52 175 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 RAB1BQ9H0U4 201 aa9.51□□□□□ -0.89
SNRNP200-208ENST00000497539 A0A1W2PPV4 95 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 SHISA9B4DS77 424 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 TOX4O94842 621 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 CLDN1O95832 211 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 CCDC144NLQ6NUI1 221 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 OR1N2Q8NGR9 330 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 P2RX4Q99571 388 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 CDC42EP3Q9UKI2 254 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 PTPRZ1P23471 2315 aaPredicted RBP9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 IGHV3OR15-7A0A075B7D8 119 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 SAP30O75446 220 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 KBTBD11O94819 623 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 ESDP10768 282 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 BRWD1-AS2P59051 145 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 SLC38A11Q08AI6 406 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 SPINK9Q5DT21 86 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 CYP2G1PQ6ZSU1 146 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 Q6ZVH6 145 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 CALYQ9NYX4 217 aa9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 RAI1Q7Z5J4 1906 aaPredicted RBP9.5□□□□□ -0.89
SNRNP200-208ENST00000497539 LRRC30A6NM36 301 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 TNFRSF13BO14836 293 aaPredicted RBP9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 CLDN14O95500 239 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 IFNA1P01562 189 aa9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 RPL30P62888 115 aaKnown RBP9.49□□□□□ -0.89
SNRNP200-208ENST00000497539 HBG1P69891 147 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms