RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 ATP6V0BQ99437 205 aa15.47■□□□□ 0.07
SCAMP3-209ENST00000497470 FAM103A1Q9BTL3 118 aaKnown RBP15.47■□□□□ 0.07
SCAMP3-209ENST00000497470 HEYLQ9NQ87 328 aaPredicted RBP15.47■□□□□ 0.07
SCAMP3-209ENST00000497470 THYN1Q9P016 225 aa15.47■□□□□ 0.07
SCAMP3-209ENST00000497470 TSC22D2O75157 780 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 OPN1MWP04001 364 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 OPN1MW2P0DN77 364 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 OPN1MW3P0DN78 364 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 PSMB8P28062 276 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 SNCAP37840 140 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 CENPVQ7Z7K6 275 aaPredicted RBP15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 OR10W1Q8NGF6 305 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 PPP1R1CQ8WVI7 109 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 HINT2Q9BX68 163 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 C11orf1Q9H5F2 150 aa15.46■□□□□ 0.07
SCAMP3-209ENST00000497470 G3V318 75 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 K7EPK0 472 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 DEDDO75618 318 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 SIX6O95475 246 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 LYL1P12980 280 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 AREGP15514 252 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 BCAP31P51572 246 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 ECSCRQ19T08 205 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 KRTAP24-1Q3LI83 254 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 KLHDC1Q8N7A1 406 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 MYOZ3Q8TDC0 251 aa15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 NOL4LQ96MY1 436 aaPredicted RBP15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 RCL1Q9Y2P8 373 aaKnown RBP15.45■□□□□ 0.06
SCAMP3-209ENST00000497470 SETD2Q9BYW2 2564 aaPredicted RBP15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 FAM223BA6NKX1 122 aa15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 RNASE2P10153 161 aaKnown RBP15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 POLR2GP62487 172 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 RAB32Q13637 225 aa15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 FAM223AQ8IWN6 122 aa15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 SLC24A4Q8NFF2 622 aa15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 OR4X2Q8NGF9 303 aa15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 RNASEH2CQ8TDP1 164 aaKnown RBP15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 USMG5Q96IX5 58 aa15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 P2RX4Q99571 388 aa15.44■□□□□ 0.06
SCAMP3-209ENST00000497470 IGLV11-55A0A075B6I3 123 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 E5RGE8 158 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 SOX15O60248 233 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 MPC2O95563 127 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 PAX9P55771 341 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 RPL23AP62750 156 aaKnown RBP15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 EXOSC2Q13868 293 aaKnown RBP15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 TMEM95Q3KNT9 176 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 KRTAP21-3Q3LHN1 58 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 NECAP1Q8NC96 275 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 FANCD2OSQ96PS1 177 aa15.43■□□□□ 0.06
SCAMP3-209ENST00000497470 NF1P21359 2839 aa15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 A0A0G2JLM5 398 aa15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 DEFA4P12838 97 aa15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 MDKP21741 143 aaPredicted RBP15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 NPY1RP25929 384 aa15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 RAB11AP62491 216 aa15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 PRSS54Q6PEW0 395 aa15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 OR5AU1Q8NGC0 362 aa15.42■□□□□ 0.06
SCAMP3-209ENST00000497470 FCGR2BP31994 310 aaPredicted RBP15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 P2RY1P47900 373 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 RAB9AP51151 201 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 CD83Q01151 205 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 AWAT1Q58HT5 328 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 TMEM65Q6PI78 240 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 OR5T1Q8NG75 326 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 VN1R17PQ8TDU5 208 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 CACNG8Q8WXS5 425 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 C19orf24Q9BVV8 132 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 MAGT1Q9H0U3 335 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 PSENENQ9NZ42 101 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 LINC00527Q9UJ94 153 aa15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 STRAPQ9Y3F4 350 aaKnown RBP15.41■□□□□ 0.06
SCAMP3-209ENST00000497470 L7N2F9 121 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 SSSCA1O60232 199 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 SCGB1D2O95969 90 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 IFNA10P01566 189 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 SLC25A4P12235 298 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 VAMP2P63027 116 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 TMEM14EPQ6UXP3 125 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 TCTE3Q8IZS6 198 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 THAP6Q8TBB0 222 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 CXorf58Q96LI9 332 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 UBE2E2Q96LR5 201 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 RNF126Q9BV68 326 aa15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 LYRM2Q9NU23 88 aaPredicted RBP15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 LSM5Q9Y4Y9 91 aaKnown RBP15.4■□□□□ 0.06
SCAMP3-209ENST00000497470 ZFHX3Q15911 3703 aa15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 C15orf62A8K5M9 175 aa15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 FNDC10F2Z333 226 aa15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 TMEM50AO95807 157 aa15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 GPX4P36969 197 aaPredicted RBP15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 CDX1P47902 265 aaPredicted RBP15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 SRSF2Q01130 221 aaKnown RBP15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 ETFRF1Q6IPR1 90 aa15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 C11orf87Q6NUJ2 197 aa15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 TXN2Q99757 166 aa15.39■□□□□ 0.05
SCAMP3-209ENST00000497470 ATRQ13535 2644 aa15.38■□□□□ 0.05
SCAMP3-209ENST00000497470 RPS10-NUDT3A0A1W2PQS6 291 aa15.38■□□□□ 0.05
SCAMP3-209ENST00000497470 H0YIZ8 118 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms