RNA–Protein interactions for RNA: ENST00000497391.5

HCLS1-212, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-212ENST00000497391 RTBDNQ9BSG5 229 aaPredicted RBP12.69□□□□□ -0.38
HCLS1-212ENST00000497391 ZNF256Q9Y2P7 627 aaPredicted RBP12.69□□□□□ -0.38
HCLS1-212ENST00000497391 F11RQ9Y624 299 aaKnown RBP12.69□□□□□ -0.38
HCLS1-212ENST00000497391 NDUFB8O95169 186 aa12.68□□□□□ -0.38
HCLS1-212ENST00000497391 AKR1C4P17516 323 aa12.68□□□□□ -0.38
HCLS1-212ENST00000497391 SNCAP37840 140 aa12.68□□□□□ -0.38
HCLS1-212ENST00000497391 KRTAP10-11P60412 298 aa12.68□□□□□ -0.38
HCLS1-212ENST00000497391 HSPE1P61604 102 aaKnown RBP12.68□□□□□ -0.38
HCLS1-212ENST00000497391 WT1-ASQ06250 92 aa12.68□□□□□ -0.38
HCLS1-212ENST00000497391 KLF5Q13887 457 aaPredicted RBP12.68□□□□□ -0.38
HCLS1-212ENST00000497391 C19orf35Q6ZS72 473 aa12.68□□□□□ -0.38
HCLS1-212ENST00000497391 NAP1L6A6NFF2 107 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 CDS2O95674 445 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 IGKV1-5P01602 117 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 TRBV12-3P01733 135 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 HOXA1P49639 335 aaPredicted RBP12.67□□□□□ -0.38
HCLS1-212ENST00000497391 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
HCLS1-212ENST00000497391 KLK9Q2XQG4 91 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 FAM106AQ4KMX7 169 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 TMEM268Q5VZI3 342 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 CLEC19AQ6UXS0 136 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 TMED4Q7Z7H5 227 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 OR1P1Q8NH06 330 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 VN1R17PQ8TDU5 208 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 IL22RA2Q969J5 263 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 SRRQ9GZT4 340 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
HCLS1-212ENST00000497391 KLK9Q9UKQ9 250 aa12.67□□□□□ -0.38
HCLS1-212ENST00000497391 BMPR1BO00238 502 aa12.66□□□□□ -0.38
HCLS1-212ENST00000497391 IGHV3-23P01764 117 aa12.66□□□□□ -0.38
HCLS1-212ENST00000497391 GALNT14Q96FL9 552 aa12.66□□□□□ -0.38
HCLS1-212ENST00000497391 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.66□□□□□ -0.38
HCLS1-212ENST00000497391 PPP5D1E7EU14 171 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 GPR183P32249 361 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 RBMS2Q15434 407 aaKnown RBP12.65□□□□□ -0.38
HCLS1-212ENST00000497391 PLET1Q6UQ28 207 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 LGI3Q8N145 548 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 DYNLRB2Q8TF09 96 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 GLYATL2Q8WU03 294 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 MISP3Q96FF7 219 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 ATP6V0BQ99437 205 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 S4R3C0 116 aa12.65□□□□□ -0.38
HCLS1-212ENST00000497391 WI2-2373I1.2A0A1W2PRP0 233 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 MFSD2BA6NFX1 497 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 DBX1A6NMT0 343 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 K7EIL1 84 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 ST8SIA3O43173 380 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 SCGB2A1O75556 95 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 CLEC3BP05452 202 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 VAMP1P23763 118 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 Q56UQ5 140 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 TMEM128Q5BJH2 165 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 LCN12Q6JVE5 192 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 OR2C3Q8N628 320 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 ZNF114Q8NC26 417 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 BSCL2Q96G97 398 aaPredicted RBP12.64□□□□□ -0.39
HCLS1-212ENST00000497391 CCDC140Q96MF4 163 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 C7orf50Q9BRJ6 194 aaKnown RBP12.64□□□□□ -0.39
HCLS1-212ENST00000497391 PALMDQ9NP74 551 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 C21orf62Q9NYP8 219 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 TMEM56-RWDD3S4R434 201 aa12.64□□□□□ -0.39
HCLS1-212ENST00000497391 A0A0B4J293 547 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 ZNF320A2RRD8 509 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 CORTO00230 105 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 OR2C1O95371 312 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 P0C879 139 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 SPCS3P61009 180 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 IZUMO4Q1ZYL8 232 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 SPSB3Q6PJ21 355 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 GPHB5Q86YW7 130 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 SELENOHQ8IZQ5 122 aaKnown RBP12.63□□□□□ -0.39
HCLS1-212ENST00000497391 CENPSQ8N2Z9 138 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 UBAC2Q8NBM4 344 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 ZNF502Q8TBZ5 544 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 PRR25Q96S07 402 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 CACNG5Q9UF02 275 aa12.63□□□□□ -0.39
HCLS1-212ENST00000497391 A0A0B4J2A0 478 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 LGALS9O00182 355 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 SULT1A3P0DMM9 295 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 SULT1A4P0DMN0 295 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 SPINK9Q5DT21 86 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 OR2K2Q8NGT1 345 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 OR52E5Q8NH55 327 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 SHPKQ9UHJ6 478 aa12.62□□□□□ -0.39
HCLS1-212ENST00000497391 LINC00854A0A1B0GVQ3 168 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 DUXBA0A1W2PPF3 345 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 OR2T8A6NH00 312 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 CEBPZOSA8MTT3 80 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 INS-IGF2F8WCM5 200 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 NUPL2O15504 423 aaKnown RBP12.61□□□□□ -0.39
HCLS1-212ENST00000497391 TGOLN2O43493 480 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 IGLV1-51P01701 117 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 HLA-AP01891 365 aaKnown RBP12.61□□□□□ -0.39
HCLS1-212ENST00000497391 UBE2MP61081 183 aaKnown RBP12.61□□□□□ -0.39
HCLS1-212ENST00000497391 CD69Q07108 199 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 TMEM187Q14656 261 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 CNPY1Q3B7I2 92 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 LINC00299Q6ZSB3 139 aa12.61□□□□□ -0.39
HCLS1-212ENST00000497391 NOXA1Q86UR1 476 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms