RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 IGSF23A1L1A6 192 aa13.56□□□□□ -0.24
LMNA-216ENST00000496738 C15orf61A6NNL5 157 aa13.56□□□□□ -0.24
LMNA-216ENST00000496738 UPK2O00526 184 aa13.56□□□□□ -0.24
LMNA-216ENST00000496738 KBTBD11O94819 623 aa13.56□□□□□ -0.24
LMNA-216ENST00000496738 IGHV1-69P01742 117 aa13.56□□□□□ -0.24
LMNA-216ENST00000496738 MT-ND4LP03901 98 aa13.56□□□□□ -0.24
LMNA-216ENST00000496738 P2RY1P47900 373 aa13.56□□□□□ -0.24
LMNA-216ENST00000496738 FAM90A9PA6NNJ1 464 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 HSBP1L1C9JCN9 74 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 SMAD7O15105 426 aaKnown RBP13.55□□□□□ -0.24
LMNA-216ENST00000496738 SNRNP70P08621 437 aaKnown RBP13.55□□□□□ -0.24
LMNA-216ENST00000496738 TMEM267Q0VDI3 215 aaPredicted RBP13.55□□□□□ -0.24
LMNA-216ENST00000496738 OR2C3Q8N628 320 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 HINT2Q9BX68 163 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 FAM90A26D6RGX4 464 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 UBA52P62987 128 aaKnown RBP13.55□□□□□ -0.24
LMNA-216ENST00000496738 GAMTQ14353 236 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 GPR157Q5UAW9 335 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 LYRM2Q9NU23 88 aaPredicted RBP13.55□□□□□ -0.24
LMNA-216ENST00000496738 BET1LQ9NYM9 111 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 PSENENQ9NZ42 101 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 OR51B2Q9Y5P1 312 aa13.55□□□□□ -0.24
LMNA-216ENST00000496738 PRRC2AP48634 2157 aaKnown RBP13.55□□□□□ -0.24
LMNA-216ENST00000496738 IFITM10A6NMD0 228 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 IL6RP08887 468 aaPredicted RBP13.54□□□□□ -0.24
LMNA-216ENST00000496738 HOXA5P20719 270 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 S100A2P29034 98 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 PJVKQ0ZLH3 352 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 VMA21Q3ZAQ7 101 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 CCDC144NLQ6NUI1 221 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 RAB40CQ96S21 281 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 CLCC1Q96S66 551 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 ATG101Q9BSB4 218 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 GPR137BO60478 399 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 CST7O76096 145 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 SPANXN5Q5MJ07 72 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 FAM120AOSQ5T036 256 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 MALSU1Q96EH3 234 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 TMEM14BQ9NUH8 114 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 TCF19Q9Y242 345 aa13.54□□□□□ -0.24
LMNA-216ENST00000496738 FOXA2Q9Y261 457 aaPredicted RBP13.54□□□□□ -0.24
LMNA-216ENST00000496738 TET2Q6N021 2002 aaPredicted RBP13.54□□□□□ -0.24
LMNA-216ENST00000496738 CD1BP29016 333 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 CDX1P47902 265 aaPredicted RBP13.53□□□□□ -0.24
LMNA-216ENST00000496738 F2RL1P55085 397 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 RPL23AP62750 156 aaKnown RBP13.53□□□□□ -0.24
LMNA-216ENST00000496738 EWSR1Q01844 656 aaKnown RBP eCLIP13.53□□□□□ -0.24
LMNA-216ENST00000496738 PSG5Q15238 335 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 KLF17Q5JT82 389 aaPredicted RBP13.53□□□□□ -0.24
LMNA-216ENST00000496738 TMEM208Q9BTX3 173 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 NDUFAF3Q9BU61 184 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 ZNF430Q9H8G1 570 aaPredicted RBP13.53□□□□□ -0.24
LMNA-216ENST00000496738 FBXL17Q9UF56 701 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 A0A0U1RQK1 487 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 GATA3P23771 443 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 LGALS7P47929 136 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 RBX1P62877 108 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 AKR1C1Q04828 323 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 MMDQ15546 238 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 C10orf55Q5SWW7 151 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 ZNF429Q86V71 674 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 TMEM252Q8N6L7 170 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 SLC24A4Q8NFF2 622 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 EAF1Q96JC9 268 aaPredicted RBP13.53□□□□□ -0.24
LMNA-216ENST00000496738 FBXL15Q9H469 300 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 GAR1Q9NY12 217 aaKnown RBP13.53□□□□□ -0.24
LMNA-216ENST00000496738 PRNDQ9UKY0 176 aa13.53□□□□□ -0.24
LMNA-216ENST00000496738 OOSP1A8MZH6 123 aa13.52□□□□□ -0.24
LMNA-216ENST00000496738 MOSP00540 346 aa13.52□□□□□ -0.24
LMNA-216ENST00000496738 RPL8P62917 257 aaKnown RBP13.52□□□□□ -0.24
LMNA-216ENST00000496738 UBAC2Q8NBM4 344 aa13.52□□□□□ -0.24
LMNA-216ENST00000496738 VSTM2AQ8TAG5 236 aa13.52□□□□□ -0.24
LMNA-216ENST00000496738 TMEM167AQ8TBQ9 72 aa13.52□□□□□ -0.24
LMNA-216ENST00000496738 WSB1Q9Y6I7 421 aa13.52□□□□□ -0.24
LMNA-216ENST00000496738 CELSR1Q9NYQ6 3014 aa13.52□□□□□ -0.25
LMNA-216ENST00000496738 A8MWP6 167 aa13.52□□□□□ -0.25
LMNA-216ENST00000496738 NPSP0C0P6 89 aa13.52□□□□□ -0.25
LMNA-216ENST00000496738 SMIM8Q96KF7 97 aa13.52□□□□□ -0.25
LMNA-216ENST00000496738 PRO1933Q9H354 126 aa13.52□□□□□ -0.25
LMNA-216ENST00000496738 ITPR2Q14571 2701 aa13.52□□□□□ -0.25
LMNA-216ENST00000496738 TEX50A0A1B0GTY4 177 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 SNRPCP09234 159 aaKnown RBP13.51□□□□□ -0.25
LMNA-216ENST00000496738 METTL15P1P0C7V9 234 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 GNB1P62873 340 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 PLGLAQ15195 96 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 MRGPRG-AS1Q2M3A8 158 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 TMEM95Q3KNT9 176 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 OR1S2Q8NGQ3 325 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 STOML3Q8TAV4 291 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 OR4C12Q96R67 309 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 FOXC2Q99958 501 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 HSPE1P61604 102 aaKnown RBP13.51□□□□□ -0.25
LMNA-216ENST00000496738 OR52E5Q8NH55 327 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 COMMD5Q9GZQ3 224 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 HEYLQ9NQ87 328 aaPredicted RBP13.51□□□□□ -0.25
LMNA-216ENST00000496738 CYTL1Q9NRR1 136 aa13.51□□□□□ -0.25
LMNA-216ENST00000496738 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.5□□□□□ -0.253e-7■■■■□ 21.1
LMNA-216ENST00000496738 E7EUB6 86 aa13.5□□□□□ -0.25
LMNA-216ENST00000496738 EREGO14944 169 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms