RNA–Protein interactions for RNA: ENST00000495122.1

CBX4-204, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 490 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-204ENST00000495122 BUB1B-PAK6H3BSN5 160 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 TSPAN9O75954 239 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 ADCYAP1P18509 176 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 MAS1LP35410 378 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 RPL8P62917 257 aaKnown RBP13.13□□□□□ -0.31
CBX4-204ENST00000495122 SRSF3P84103 164 aaKnown RBP13.13□□□□□ -0.31
CBX4-204ENST00000495122 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 C2orf83Q53S99 150 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 KHDC3LQ587J8 217 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 ZNF506Q5JVG8 444 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 CYB5R2Q6BCY4 276 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 TEX45Q8NA69 505 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 OR11H6Q8NGC7 330 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 SPATA3Q8NHX4 192 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 SFT2D1Q8WV19 159 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 COMMD5Q9GZQ3 224 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 CDC42EP3Q9UKI2 254 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 FAM96BQ9Y3D0 163 aa13.13□□□□□ -0.31
CBX4-204ENST00000495122 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
CBX4-204ENST00000495122 CTXND1A0A1B0GTU2 59 aa13.12□□□□□ -0.31
CBX4-204ENST00000495122 AGPAT2O15120 278 aa13.12□□□□□ -0.31
CBX4-204ENST00000495122 HSPB1P04792 205 aaKnown RBP13.12□□□□□ -0.31
CBX4-204ENST00000495122 CEACAM3P40198 252 aa13.12□□□□□ -0.31
CBX4-204ENST00000495122 RPS16P62249 146 aaKnown RBP13.12□□□□□ -0.31
CBX4-204ENST00000495122 AKR1C1Q04828 323 aa13.12□□□□□ -0.31
CBX4-204ENST00000495122 ACOT6Q3I5F7 207 aaPredicted RBP13.12□□□□□ -0.31
CBX4-204ENST00000495122 NPVFQ9HCQ7 196 aa13.12□□□□□ -0.31
CBX4-204ENST00000495122 SVEP1Q4LDE5 3571 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 IGHV4-61A0A0C4DH41 118 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 TEX50A0A1B0GTY4 177 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 SRRM4A7MD48 611 aaKnown RBP13.11□□□□□ -0.31
CBX4-204ENST00000495122 CYB5BO43169 146 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 IFNA4P05014 189 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 OPRK1P41145 380 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 PPT1P50897 306 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 ERHP84090 104 aaKnown RBP13.11□□□□□ -0.31
CBX4-204ENST00000495122 RAB31Q13636 194 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 SPINK9Q5DT21 86 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 RCC1LQ96I51 464 aaKnown RBP13.11□□□□□ -0.31
CBX4-204ENST00000495122 ACTR3CQ9C0K3 210 aaPredicted RBP13.11□□□□□ -0.31
CBX4-204ENST00000495122 TMEM231Q9H6L2 316 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 NDUFA4L2Q9NRX3 87 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 ZNRD1Q9P1U0 126 aa13.11□□□□□ -0.31
CBX4-204ENST00000495122 OOSP1A8MZH6 123 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 RRHO14718 337 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 ENSAO43768 121 aaKnown RBP13.1□□□□□ -0.31
CBX4-204ENST00000495122 IGLV2-23P01705 113 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 PRTN3P24158 256 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 SUB1P53999 127 aaKnown RBP eCLIP13.1□□□□□ -0.31
CBX4-204ENST00000495122 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
CBX4-204ENST00000495122 MMD2Q8IY49 270 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 OR4P4Q8NGL7 312 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 CLDND2Q8NHS1 167 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 P2RX4Q99571 388 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 BPESC1Q9GZL8 116 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 SLC39A9Q9NUM3 307 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 ONECUT1Q9UBC0 465 aa13.1□□□□□ -0.31
CBX4-204ENST00000495122 DOCK11Q5JSL3 2073 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 IGHV1-3A0A0C4DH29 117 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 MAP1LC3B2A6NCE7 125 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 SEC14L6B5MCN3 397 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 C22orf46C9J442 243 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 LY6LH3BQJ8 138 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 CA2P00918 260 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 FFAR4Q5NUL3 377 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 TREML4Q6UXN2 200 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 CACNG8Q8WXS5 425 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 RPEQ96AT9 228 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 MAP1LC3BQ9GZQ8 125 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 LSM4Q9Y4Z0 139 aaKnown RBP13.09□□□□□ -0.31
CBX4-204ENST00000495122 INSIG2Q9Y5U4 225 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 RFNGQ9Y644 331 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 STAB1Q9NY15 2570 aa13.09□□□□□ -0.31
CBX4-204ENST00000495122 LOC102723971A0A1B0GUV8 181 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 SCO1O75880 301 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 HTR1DP28221 377 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 GPX4P36969 197 aaPredicted RBP13.08□□□□□ -0.32
CBX4-204ENST00000495122 REG1BP48304 166 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 COMPP49747 757 aaPredicted RBP13.08□□□□□ -0.32
CBX4-204ENST00000495122 GUCA2BQ16661 112 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 TEPPQ6URK8 271 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 OR10G9Q8NGN4 311 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 OR10G7Q8NGN6 311 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 RNASEH2CQ8TDP1 164 aaKnown RBP13.08□□□□□ -0.32
CBX4-204ENST00000495122 TMEM170AQ8WVE7 144 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 SRSF8Q9BRL6 282 aaKnown RBP13.08□□□□□ -0.32
CBX4-204ENST00000495122 MANBALQ9NQG1 85 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 DPM3Q9P2X0 92 aa13.08□□□□□ -0.32
CBX4-204ENST00000495122 TET2Q6N021 2002 aaPredicted RBP13.07□□□□□ -0.32
CBX4-204ENST00000495122 ODF3BA8MYP8 253 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 IGHV2-5P01817 119 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 BCL2P10415 239 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 ELLP55199 621 aaPredicted RBP13.07□□□□□ -0.32
CBX4-204ENST00000495122 BTN1A1Q13410 526 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 HABP2Q14520 560 aaPredicted RBP13.07□□□□□ -0.32
CBX4-204ENST00000495122 ZNF726P1Q15940 193 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 TPTE2P1Q5T6R2 138 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 MINOS1Q5TGZ0 78 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 CCDC144NLQ6NUI1 221 aa13.07□□□□□ -0.32
CBX4-204ENST00000495122 ACSM6Q6P461 480 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms