RNA–Protein interactions for RNA: ENST00000494913.5

COL20A1-207, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 2

Gene COL20A1, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-207ENST00000494913 MARCH1Q8TCQ1 289 aa13.66□□□□□ -0.22
COL20A1-207ENST00000494913 LSM10Q969L4 123 aaKnown RBP13.66□□□□□ -0.22
COL20A1-207ENST00000494913 TMEM14BQ9NUH8 114 aa13.66□□□□□ -0.22
COL20A1-207ENST00000494913 IZUMO1RA6ND01 250 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 FRMD6-AS1P0C7T7 363 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 MECP2P51608 486 aaKnown RBP13.65□□□□□ -0.22
COL20A1-207ENST00000494913 ZNF79Q15937 498 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 CNPY1Q3B7I2 92 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 TRIQKQ629K1 86 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 LCN12Q6JVE5 192 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 OR5B3Q8NH48 314 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 OR4A16Q8NH70 328 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 ZNF502Q8TBZ5 544 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 MRGPRFQ96AM1 343 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 ZC4H2Q9NQZ6 224 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 SLC2A8Q9NY64 477 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 U3KQK5 164 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 TENM3Q9P273 2699 aa13.65□□□□□ -0.22
COL20A1-207ENST00000494913 TEX13DA0A0J9YY54 714 aaPredicted RBP13.64□□□□□ -0.23
COL20A1-207ENST00000494913 ZNF320A2RRD8 509 aa13.64□□□□□ -0.23
COL20A1-207ENST00000494913 C15orf61A6NNL5 157 aa13.64□□□□□ -0.23
COL20A1-207ENST00000494913 LGALS9O00182 355 aa13.64□□□□□ -0.23
COL20A1-207ENST00000494913 FAM106AQ4KMX7 169 aa13.64□□□□□ -0.23
COL20A1-207ENST00000494913 ZNF57Q68EA5 555 aaPredicted RBP13.64□□□□□ -0.23
COL20A1-207ENST00000494913 SBSPONQ8IVN8 264 aa13.64□□□□□ -0.23
COL20A1-207ENST00000494913 TMEM56Q96MV1 263 aa13.64□□□□□ -0.23
COL20A1-207ENST00000494913 C3orf85A0A1B0GTC6 90 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 C2orf70A6NJV1 201 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 FOLR2P14207 255 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 EDN2P20800 178 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 GPR183P32249 361 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 MFAP2P55001 183 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 TRIM16LQ309B1 348 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 VN1R17PQ8TDU5 208 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 DYNLRB2Q8TF09 96 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 TRIM63Q969Q1 353 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 TP53RKQ96S44 253 aa13.63□□□□□ -0.23
COL20A1-207ENST00000494913 F11RQ9Y624 299 aaKnown RBP13.63□□□□□ -0.23
COL20A1-207ENST00000494913 IGHV4-30-4P0DP06 118 aa13.62□□□□□ -0.23
COL20A1-207ENST00000494913 CD300EQ496F6 205 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-207ENST00000494913 SGPP2Q8IWX5 399 aa13.62□□□□□ -0.23
COL20A1-207ENST00000494913 OR2K2Q8NGT1 345 aa13.62□□□□□ -0.23
COL20A1-207ENST00000494913 WWC2-AS2Q96NR7 200 aa13.62□□□□□ -0.23
COL20A1-207ENST00000494913 SRRQ9GZT4 340 aa13.62□□□□□ -0.23
COL20A1-207ENST00000494913 IGHV3-21A0A0B4J1V1 117 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 AKR1C2P52895 323 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 KLF9Q13886 244 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-207ENST00000494913 IZUMO4Q1ZYL8 232 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 DEFB114Q30KQ6 69 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 SP6Q3SY56 376 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 PLET1Q6UQ28 207 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 GTSCR1Q86UQ5 136 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 RNASE11Q8TAA1 199 aaKnown RBP13.61□□□□□ -0.23
COL20A1-207ENST00000494913 KCNIP3Q9Y2W7 256 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 STAB2Q8WWQ8 2551 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 IGHV3-35A0A0C4DH35 117 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 CBLN1P23435 193 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 HSPE1P61604 102 aaKnown RBP13.61□□□□□ -0.23
COL20A1-207ENST00000494913 CACNG8Q8WXS5 425 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 PTTG2Q9NZH5 202 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 GPR132Q9UNW8 380 aa13.61□□□□□ -0.23
COL20A1-207ENST00000494913 OR2T8A6NH00 312 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 CENPXA8MT69 81 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 IGKV1-5P01602 117 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 UNQ9165/PRO28630Q6UXU0 137 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 LINC00299Q6ZSB3 139 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 OR1L6Q8NGR2 347 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 OR1P1Q8NH06 330 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 SCARB1Q8WTV0 552 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 RRNAD1Q96FB5 475 aaKnown RBP13.6□□□□□ -0.23
COL20A1-207ENST00000494913 C5orf66Q9H5L9 145 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 NAA60Q9H7X0 242 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 TECRQ9NZ01 308 aaKnown RBP13.6□□□□□ -0.23
COL20A1-207ENST00000494913 SELENOKQ9Y6D0 94 aa13.6□□□□□ -0.23
COL20A1-207ENST00000494913 PIGBOS1A0A0B4J2F0 54 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 TMEM213A2RRL7 107 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 ZNF785A8K8V0 405 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 TGOLN2O43493 480 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 PRCDQ00LT1 54 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 DHODHQ02127 395 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 TM4SF20Q53R12 229 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 OR2C3Q8N628 320 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 SLC25A21Q9BQT8 299 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-207ENST00000494913 RTBDNQ9BSG5 229 aaPredicted RBP13.59□□□□□ -0.23
COL20A1-207ENST00000494913 C19orf73Q9NVV2 129 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 C21orf62Q9NYP8 219 aa13.59□□□□□ -0.23
COL20A1-207ENST00000494913 A0A0B4J293 547 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 NAP1L6A6NFF2 107 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 A8MWP6 167 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 A8MZ25 164 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 K7EIM0 57 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 ANXA3P12429 323 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 UCP1P25874 307 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 GUCA2BQ16661 112 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 SPINK9Q5DT21 86 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 UBAC2Q8NBM4 344 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 UXS1Q8NBZ7 420 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 BSCL2Q96G97 398 aaPredicted RBP13.58□□□□□ -0.24
COL20A1-207ENST00000494913 TUBA4BQ9H853 241 aa13.58□□□□□ -0.24
COL20A1-207ENST00000494913 PALMDQ9NP74 551 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms