RNA–Protein interactions for RNA: ENST00000494243.5

TTC3-224, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 861 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-224ENST00000494243 TMEM14BQ9NUH8 114 aa17.7■□□□□ 0.42
TTC3-224ENST00000494243 PRNDQ9UKY0 176 aa17.7■□□□□ 0.42
TTC3-224ENST00000494243 ZNF207O43670 478 aaKnown RBP17.69■□□□□ 0.42
TTC3-224ENST00000494243 CTSGP08311 255 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 PRSS3P35030 304 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 BMI1P35226 326 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 TNFRSF9Q07011 255 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 DEFB135Q30KP9 77 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 OR5B3Q8NH48 314 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 LINC00476Q8WZB0 136 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 YIPF6Q96EC8 236 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 ALMS1Q8TCU4 4167 aa17.69■□□□□ 0.42
TTC3-224ENST00000494243 PLECQ15149 4684 aaKnown RBP17.68■□□□□ 0.42
TTC3-224ENST00000494243 UBE2CO00762 179 aa17.68■□□□□ 0.42
TTC3-224ENST00000494243 HRH1P35367 487 aa17.68■□□□□ 0.42
TTC3-224ENST00000494243 LSM3P62310 102 aaKnown RBP17.68■□□□□ 0.42
TTC3-224ENST00000494243 LYG2Q86SG7 212 aa17.68■□□□□ 0.42
TTC3-224ENST00000494243 UBAC2Q8NBM4 344 aa17.68■□□□□ 0.42
TTC3-224ENST00000494243 TSPAN14Q8NG11 270 aa17.68■□□□□ 0.42
TTC3-224ENST00000494243 TMEM56Q96MV1 263 aa17.68■□□□□ 0.42
TTC3-224ENST00000494243 FKBP11Q9NYL4 201 aa17.68■□□□□ 0.42
TTC3-224ENST00000494243 KIR2DL5BA0A0G2JN68 375 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 KIR2DL5BA0A0G2JPC4 375 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 C15orf62A8K5M9 175 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 CTSDP07339 412 aaPredicted RBP17.67■□□□□ 0.42
TTC3-224ENST00000494243 HLA-DMAP28067 261 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 PMS2P11Q13670 270 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 PHLDA2Q53GA4 152 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 Q56UQ5 140 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 KIR2DL5AQ8N109 375 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 OR1P1Q8NH06 330 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 KIR2DL5BQ8NHK3 375 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 GPX8Q8TED1 209 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 SMPXQ9UHP9 88 aa17.67■□□□□ 0.42
TTC3-224ENST00000494243 CXorf65A6NEN9 183 aa17.66■□□□□ 0.42
TTC3-224ENST00000494243 OR4C46A6NHA9 309 aa17.66■□□□□ 0.42
TTC3-224ENST00000494243 C15orf61A6NNL5 157 aa17.66■□□□□ 0.42
TTC3-224ENST00000494243 EIF4EP06730 217 aaKnown RBP17.66■□□□□ 0.42
TTC3-224ENST00000494243 RNF183Q96D59 192 aa17.66■□□□□ 0.42
TTC3-224ENST00000494243 TSC22D3Q99576 134 aa17.66■□□□□ 0.42
TTC3-224ENST00000494243 FAM212BQ9NTI7 297 aaPredicted RBP17.66■□□□□ 0.42
TTC3-224ENST00000494243 I3L2K1 104 aa17.65■□□□□ 0.42
TTC3-224ENST00000494243 IGKV1-39P01597 117 aa17.65■□□□□ 0.42
TTC3-224ENST00000494243 IGKV1D-39P04432 117 aa17.65■□□□□ 0.42
TTC3-224ENST00000494243 STPG3Q8N7X2 389 aa17.65■□□□□ 0.42
TTC3-224ENST00000494243 SEC22AQ96IW7 307 aa17.65■□□□□ 0.42
TTC3-224ENST00000494243 RNF2Q99496 336 aa17.65■□□□□ 0.42
TTC3-224ENST00000494243 RPL35AP18077 110 aaKnown RBP17.64■□□□□ 0.41
TTC3-224ENST00000494243 TBC1D26Q86UD7 250 aa17.64■□□□□ 0.41
TTC3-224ENST00000494243 SLC25A46Q96AG3 418 aa17.64■□□□□ 0.41
TTC3-224ENST00000494243 MAP6D1Q9H9H5 199 aa17.64■□□□□ 0.41
TTC3-224ENST00000494243 IGHV7-4-1A0A0J9YVY3 117 aa17.63■□□□□ 0.41
TTC3-224ENST00000494243 NUPR2A6NF83 97 aa17.63■□□□□ 0.41
TTC3-224ENST00000494243 CHEK1O14757 476 aa17.63■□□□□ 0.41
TTC3-224ENST00000494243 ATF4P18848 351 aaPredicted RBP17.63■□□□□ 0.41
TTC3-224ENST00000494243 FCGR2BP31994 310 aaPredicted RBP17.63■□□□□ 0.41
TTC3-224ENST00000494243 LPCAT3Q6P1A2 487 aa17.63■□□□□ 0.41
TTC3-224ENST00000494243 CEMP1Q6PRD7 247 aaPredicted RBP17.63■□□□□ 0.41
TTC3-224ENST00000494243 GALNT14Q96FL9 552 aa17.63■□□□□ 0.41
TTC3-224ENST00000494243 OR10C1Q96KK4 312 aa17.63■□□□□ 0.41
TTC3-224ENST00000494243 RHPN1-AS1Q9BWJ2 59 aa17.63■□□□□ 0.41
TTC3-224ENST00000494243 NUPL2O15504 423 aaKnown RBP17.62■□□□□ 0.41
TTC3-224ENST00000494243 LY6G6CO95867 125 aa17.62■□□□□ 0.41
TTC3-224ENST00000494243 TSPAN5P62079 268 aa17.62■□□□□ 0.41
TTC3-224ENST00000494243 APRG1Q8IVJ8 170 aa17.62■□□□□ 0.41
TTC3-224ENST00000494243 TMEM116Q8NCL8 245 aa17.62■□□□□ 0.41
TTC3-224ENST00000494243 MISP3Q96FF7 219 aa17.62■□□□□ 0.41
TTC3-224ENST00000494243 TXN2Q99757 166 aa17.62■□□□□ 0.41
TTC3-224ENST00000494243 IGHV3-49A0A0A0MS15 119 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 MFAP4P55083 255 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 UCP3P55916 312 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 RELQ04864 619 aaPredicted RBP17.61■□□□□ 0.41
TTC3-224ENST00000494243 ZNF124Q15973 351 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 H2BFWTQ7Z2G1 175 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 ZNF114Q8NC26 417 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 NXF2Q9GZY0 626 aaKnown RBP17.61■□□□□ 0.41
TTC3-224ENST00000494243 SCPEP1Q9HB40 452 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 COMMD3Q9UBI1 195 aa17.61■□□□□ 0.41
TTC3-224ENST00000494243 MT-CO2P00403 227 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 IGHV3-48P01763 117 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 APOA1P02647 267 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 S100GP29377 79 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 PRCDQ00LT1 54 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 FAM90A2PQ658T7 463 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 OR4A16Q8NH70 328 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 MRGPRFQ96AM1 343 aa17.6■□□□□ 0.41
TTC3-224ENST00000494243 A0A087WXM4 84 aa17.59■□□□□ 0.41
TTC3-224ENST00000494243 YIF1AO95070 293 aa17.59■□□□□ 0.41
TTC3-224ENST00000494243 HSPE1P61604 102 aaKnown RBP17.59■□□□□ 0.41
TTC3-224ENST00000494243 SNX29P2Q8IUI4 249 aa17.59■□□□□ 0.41
TTC3-224ENST00000494243 CMTM3Q96MX0 182 aa17.59■□□□□ 0.41
TTC3-224ENST00000494243 TRAV14DV4A0A0A6YYC5 116 aa17.58■□□□□ 0.4
TTC3-224ENST00000494243 SMIM31A0A1B0GVY4 71 aa17.58■□□□□ 0.4
TTC3-224ENST00000494243 RCVRNP35243 200 aa17.58■□□□□ 0.4
TTC3-224ENST00000494243 NCS1P62166 190 aa17.58■□□□□ 0.4
TTC3-224ENST00000494243 ELK1P19419 428 aa17.57■□□□□ 0.4
TTC3-224ENST00000494243 TFPI2P48307 235 aa17.57■□□□□ 0.4
TTC3-224ENST00000494243 IZUMO4Q1ZYL8 232 aa17.57■□□□□ 0.4
TTC3-224ENST00000494243 CSTL1Q9H114 145 aa17.57■□□□□ 0.4
TTC3-224ENST00000494243 VCX3AQ9NNX9 186 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms