RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 MANBALQ9NQG1 85 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 SLC39A9Q9NUM3 307 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 VAX2Q9UIW0 290 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 ABCA2Q9BZC7 2435 aa8.56□□□□□ -1.04
CLCN6-208ENST00000494028 FLNCQ14315 2725 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 TIMM23O14925 209 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 VENTXO95231 258 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 PRTN3P24158 256 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 AKR1C3P42330 323 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 RPL27AP46776 148 aaKnown RBP8.55□□□□□ -1.04
CLCN6-208ENST00000494028 B2MP61769 119 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 ARF6P62330 175 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 SSBP2P81877 361 aaPredicted RBP8.55□□□□□ -1.04
CLCN6-208ENST00000494028 PRR20EP86478 221 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 PRR20CP86479 221 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 PRR20DP86480 221 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 PRR20BP86481 221 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 PRR20AP86496 221 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 PAX2Q02962 417 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 CD69Q07108 199 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 TEPPQ6URK8 271 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 TMEM144Q7Z5S9 345 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 MMD2Q8IY49 270 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 C20orf24Q9BUV8 137 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 SIRPDQ9H106 197 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 TMPRSS5Q9H3S3 457 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 UNKLQ9H9P5 680 aaKnown RBP8.55□□□□□ -1.04
CLCN6-208ENST00000494028 NPVFQ9HCQ7 196 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 INSIG2Q9Y5U4 225 aa8.55□□□□□ -1.04
CLCN6-208ENST00000494028 IGKV1OR2-108A0A075B7D4 117 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 IGHV2-70DA0A0C4DH43 119 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 LOC105371267A0A1B0GV96 52 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 C7orf77A4D0Y5 90 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 M0R036 132 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 CYB5BO43169 146 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 NDUFS6O75380 124 aaKnown RBP8.54□□□□□ -1.04
CLCN6-208ENST00000494028 IGHV4-39P01824 125 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 SNRNP70P08621 437 aaKnown RBP8.54□□□□□ -1.04
CLCN6-208ENST00000494028 PAX6P26367 422 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 ZFP36P26651 326 aaKnown RBP8.54□□□□□ -1.04
CLCN6-208ENST00000494028 HTR1DP28221 377 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 RPL29P47914 159 aaKnown RBP8.54□□□□□ -1.04
CLCN6-208ENST00000494028 CD81P60033 236 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 ERHP84090 104 aaKnown RBP8.54□□□□□ -1.04
CLCN6-208ENST00000494028 HABP2Q14520 560 aaPredicted RBP8.54□□□□□ -1.04
CLCN6-208ENST00000494028 TMEM249Q2WGJ8 235 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 AKIRIN2Q53H80 203 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 FBLN7Q53RD9 439 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 PVRIGQ6DKI7 326 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 VMO1Q7Z5L0 202 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 LHFPL4Q7Z7J7 247 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 ZNF114Q8NC26 417 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 GATAD1Q8WUU5 269 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 SLC35E1Q96K37 410 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 P2RX4Q99571 388 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 BPESC1Q9GZL8 116 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 SLC45A2Q9UMX9 530 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 SIGLEC9Q9Y336 463 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 RELNP78509 3460 aa8.54□□□□□ -1.04
CLCN6-208ENST00000494028 USP9XQ93008 2570 aaPredicted RBP8.54□□□□□ -1.04
CLCN6-208ENST00000494028 TEX22C9J3V5 150 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 H3BQ15 152 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 LINC00869P0C866 280 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 STAG3L2P0CL84 134 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 STAG3L3P0CL85 134 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 MAS1LP35410 378 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 TAGLN2P37802 199 aaKnown RBP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 COMPP49747 757 aaPredicted RBP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 CEBPGP53567 150 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 MEF2BQ02080 365 aaPredicted RBP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 SRSF1Q07955 248 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 TNXAQ16473 311 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 SPATA31B1PQ5VZV4 182 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 RNASEH2CQ8TDP1 164 aaKnown RBP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 FBXL15Q9H469 300 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 FNDC4Q9H6D8 234 aaPredicted RBP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 RPS10P5Q9NQ39 176 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 SMCO4Q9NRQ5 59 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 DPM3Q9P2X0 92 aa8.53□□□□□ -1.04
CLCN6-208ENST00000494028 METTL1Q9UBP6 276 aaKnown RBP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 PUS1Q9Y606 427 aaKnown RBP eCLIP8.53□□□□□ -1.04
CLCN6-208ENST00000494028 MYO18BQ8IUG5 2567 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 DOPEY1Q5JWR5 2465 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 NDUFA3O95167 84 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 REG1AP05451 166 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 ARL14EPLP0DKL9 152 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 AREGP15514 252 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 ATF4P18848 351 aaPredicted RBP8.52□□□□□ -1.05
CLCN6-208ENST00000494028 OR10J1P30954 320 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 CEACAM3P40198 252 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 PSMB3P49720 205 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 MFAP2P55001 183 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 LMO4P61968 165 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 LCN2P80188 198 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 GAMTQ14353 236 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 RBMS3Q6XE24 437 aaKnown RBP8.52□□□□□ -1.05
CLCN6-208ENST00000494028 C19orf35Q6ZS72 473 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 C1orf122Q6ZSJ8 110 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 SLC35E3Q7Z769 313 aa8.52□□□□□ -1.05
CLCN6-208ENST00000494028 IQCF2Q8IXL9 164 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms