RNA–Protein interactions for RNA: ENST00000493903.1

GTF3A-208, Transcript of general transcription factor IIIA, humanhuman

TSL 3

Gene GTF3A, Length 748 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-208ENST00000493903 CD200R1Q8TD46 325 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 AP3S1Q92572 193 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 UBE2WQ96B02 151 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 STARD4Q96DR4 205 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 SLC25A44Q96H78 314 aaPredicted RBP2.65□□□□□ -1.99
GTF3A-208ENST00000493903 BTF3L4Q96K17 158 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 PRRT1Q99946 306 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 SEC22CQ9BRL7 303 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 TRIM4Q9C037 500 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 DCSTAMPQ9H295 470 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 HHLA2Q9UM44 414 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 CARHSP1Q9Y2V2 147 aaKnown RBP2.65□□□□□ -1.99
GTF3A-208ENST00000493903 PXMP4Q9Y6I8 212 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 ZZEF1O43149 2961 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 FRYQ5TBA9 3013 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 CCDC171Q6TFL3 1326 aa2.65□□□□□ -1.99
GTF3A-208ENST00000493903 FAM208BQ5VWN6 2430 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 TMED7-TICAM2A0A0A6YYA0 188 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 TMEM150BA6NC51 233 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 A6NED7 52 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 H3BQ85 93 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 C15orf65H3BRN8 121 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 BHLHE40O14503 412 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 CNIH1O95406 144 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 TTRP02766 147 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 DR1Q01658 176 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 BIKQ13323 160 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 EBI3Q14213 229 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 OR8G1Q15617 311 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 PYCR3Q53H96 274 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 LDLRAD2Q5SZI1 272 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 KPRPQ5T749 579 aaPredicted RBP2.64□□□□□ -1.99
GTF3A-208ENST00000493903 SPINT4Q6UDR6 99 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 C20orf196Q8IYI0 205 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 C1orf174Q8IYL3 243 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 ZFAND2AQ8N6M9 145 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 OR10X1Q8NGY0 326 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 HIST1H2BAQ96A08 127 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 BORCS7Q96B45 105 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 CEP19Q96LK0 163 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 CCL13Q99616 98 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 SELENOSQ9BQE4 189 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 SCRT1Q9BWW7 348 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 NKX6-2Q9C056 277 aaPredicted RBP2.64□□□□□ -1.99
GTF3A-208ENST00000493903 NMNAT1Q9HAN9 279 aaPredicted RBP2.64□□□□□ -1.99
GTF3A-208ENST00000493903 DOK5Q9P104 306 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF391Q9UJN7 358 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 ANAPC10Q9UM13 185 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 OR51B4Q9Y5P0 310 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 FANCMQ8IYD8 2048 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 CEP295Q9C0D2 2601 aa2.64□□□□□ -1.99
GTF3A-208ENST00000493903 ANKRD11Q6UB99 2663 aaPredicted RBP2.64□□□□□ -1.99
GTF3A-208ENST00000493903 FASNP49327 2511 aaKnown RBP2.63□□□□□ -1.99
GTF3A-208ENST00000493903 OR6C6A6NF89 314 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 KRTAP9-6A8MVA2 160 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 RPL36A-HNRNPH2H7BZ11 118 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 LECT2O14960 151 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 IGHV3-53P01767 116 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 HLA-DQB2P05538 268 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 IGHV3-30-3P0DP02 117 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 HIST1H1TP22492 207 aaPredicted RBP2.63□□□□□ -1.99
GTF3A-208ENST00000493903 CRABP2P29373 138 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 CD52P31358 61 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 PPP1CCP36873 323 aaKnown RBP2.63□□□□□ -1.99
GTF3A-208ENST00000493903 TAS2R45P59539 299 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 KRTAP10-3P60369 221 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 DEFA6Q01524 100 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 CAV1Q03135 178 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 FABP9Q0Z7S8 132 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 TAF1AQ15573 450 aaPredicted RBP2.63□□□□□ -1.99
GTF3A-208ENST00000493903 LIN52Q52LA3 116 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 HACD4Q5VWC8 232 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 DHRS4L2Q6PKH6 230 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 ADM2Q7Z4H4 148 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF680Q8NEM1 530 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF721Q8TF20 911 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 GNPNAT1Q96EK6 184 aaPredicted RBP2.63□□□□□ -1.99
GTF3A-208ENST00000493903 SFRP2Q96HF1 295 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF285Q96NJ3 590 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 FAM96AQ9H5X1 160 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 OR5V1Q9UGF6 321 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 SLC23A2Q9UGH3 650 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 AK3Q9UIJ7 227 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 PRELID3BQ9Y3B1 194 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 PATJQ8NI35 1801 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 WDFY3Q8IZQ1 3526 aa2.63□□□□□ -1.99
GTF3A-208ENST00000493903 SMG1Q96Q15 3661 aaKnown RBP2.62□□□□□ -1.99
GTF3A-208ENST00000493903 SETXQ7Z333 2677 aaKnown RBP2.62□□□□□ -1.99
GTF3A-208ENST00000493903 PRRC2AP48634 2157 aaKnown RBP2.62□□□□□ -1.99
GTF3A-208ENST00000493903 IGKV2-28A0A075B6P5 120 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 A0A0B4J2C4 111 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 A0A1B0GW54 56 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 COLCA2A8K830 154 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 TMEM238C9JI98 176 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 ZNF878C9JN71 531 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 IGKV2D-28P01615 120 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 IGHMP01871 453 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 PFN1P07737 140 aaKnown RBP2.62□□□□□ -1.99
GTF3A-208ENST00000493903 GNG10P50151 68 aa2.62□□□□□ -1.99
GTF3A-208ENST00000493903 TNFAIP6P98066 277 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms