RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 LHFPL6Q9Y693 200 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 NALCNQ8IZF0 1738 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 ZNF625Q96I27 306 aaPredicted RBP6.63□□□□□ -1.35
BRCA1-221ENST00000493795 RNASE7Q9H1E1 156 aaKnown RBP6.63□□□□□ -1.35
BRCA1-221ENST00000493795 LAMB4A4D0S4 1761 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 A0A1W2PPV9 198 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 FOXS1O43638 330 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 RPL23P62829 140 aaKnown RBP6.63□□□□□ -1.35
BRCA1-221ENST00000493795 RHOGP84095 191 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 ASPHD2Q6ICH7 369 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 GNB1LQ9BYB4 327 aa6.63□□□□□ -1.35
BRCA1-221ENST00000493795 NWD2Q9ULI1 1742 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 TRBV5-3A0A0A0MS03 114 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 TRAV8-3A0A0A6YYJ7 113 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 OVOL1O14753 267 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 IGHV3-11P01762 117 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 C1QAP02745 245 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 LIMS1P48059 325 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 ACP7Q6ZNF0 438 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 OR10W1Q8NGF6 305 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 OSTCQ9NRP0 149 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 FER1L6Q2WGJ9 1857 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 MYH13Q9UKX3 1938 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 TRAV14DV4A0A0A6YYC5 116 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 TEX43Q6ZNM6 134 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 ZIC4Q8N9L1 334 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 AMELYQ99218 206 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 R3HDMLQ9H3Y0 253 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 SPINK8P0C7L1 97 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 ZNF124Q15973 351 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 C8orf82Q6P1X6 216 aaPredicted RBP6.62□□□□□ -1.35
BRCA1-221ENST00000493795 IFITM3Q01628 133 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 MESP2Q0VG99 397 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 FOXL1Q12952 345 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 COLCA1Q6ZS62 124 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 HAPLN4Q86UW8 402 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 PSG8Q9UQ74 426 aa6.62□□□□□ -1.35
BRCA1-221ENST00000493795 IGHV3OR16-8A0A075B7F1 116 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 TMEM8BA6NDV4 472 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 CEACAM8P31997 349 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-221ENST00000493795 TMEM52Q8NDY8 209 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 PRSS22Q9GZN4 317 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 LOC102723996A0A087X1L8 192 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 TMEM14DPA8MWL7 114 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 CD5LO43866 347 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 UMODP07911 640 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 CRYBA2P53672 197 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 BCL6BQ8N143 479 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-221ENST00000493795 ZNRF1Q8ND25 227 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 SPANXDQ9BXN6 97 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 SNHG12Q9BXW3 62 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 ANKRD36CQ5JPF3 1778 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 CENPVL1A0A0U1RR11 272 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 IL9P15248 144 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 FAM168AQ92567 244 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 ZNF501Q96CX3 271 aaPredicted RBP6.61□□□□□ -1.35
BRCA1-221ENST00000493795 A6NNC1 897 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 SOCS3O14543 225 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 IGHMP01871 453 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 C3orf36Q3SXR2 165 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 NRN1LQ496H8 165 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 LILRA6Q6PI73 481 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 TMEM190Q8WZ59 177 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 CFHR5Q9BXR6 569 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 TMEM126AQ9H061 195 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 KNDC1Q76NI1 1749 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 C17orf98A8MV24 154 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 C12orf77C9JDV5 145 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 NBR2O15453 112 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 PEBP1P30086 187 aaKnown RBP6.61□□□□□ -1.35
BRCA1-221ENST00000493795 C6orf226Q5I0X4 101 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 TCTEX1D4Q5JR98 221 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 RNF125Q96EQ8 232 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 GTSF1LQ9H1H1 148 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 NEUROG3Q9Y4Z2 214 aa6.61□□□□□ -1.35
BRCA1-221ENST00000493795 TCRBV4S1A1TA0A5B7 111 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 NCR2O95944 276 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 CELA2AP08217 269 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 INAFM2P0DMQ5 153 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 ZP1P60852 638 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 RCHY1Q96PM5 261 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 NRTNQ99748 197 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 C7orf69Q9H7B7 122 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 LILRA1O75019 489 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 RPL36AP83881 106 aaKnown RBP6.6□□□□□ -1.35
BRCA1-221ENST00000493795 ERCC8Q13216 396 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 TMEM144Q7Z5S9 345 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 PLPPR1Q8TBJ4 325 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 RPL36ALQ969Q0 106 aaKnown RBP6.6□□□□□ -1.35
BRCA1-221ENST00000493795 SRXN1Q9BYN0 137 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 A0A1W2PRE2 83 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 MSGN1A6NI15 193 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 RAMP1O60894 148 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 FAM90A2PQ658T7 463 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 SPRED2Q7Z698 418 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 ZNF525Q8N782 197 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 LINC01560Q8TB33 94 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 TSKUQ8WUA8 353 aa6.6□□□□□ -1.35
BRCA1-221ENST00000493795 NPIPB13A6NJU9 1138 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms